PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG040170.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 362aa MW: 40079.1 Da PI: 6.7635

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG040170.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.3	6.4e-09	286	324	17	55
HHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 17 elFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 e+ +k +yps++++ LA+++gL+ +q+ +WF N+R ++ TRIDC4AG040170.3 286 EMHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRH 324 5566789*****************************885 PP
2	ELK	37.1	6.7e-13	244	265	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+Ll+KYsgyL+sLkqE+s TRIDC4AG040170.3 244 ELKHHLLKKYSGYLSSLKQELS 265 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MEEIGHHFGL GATAHGQHHS QLPWGSSPLS AVIAPPPQQQ QQQQSAGYLA HSPLSLNTAP 60 PSGSHGGGTG CSNPVLQLAN GSLLEACAKA AKEPSSSSYA ADVEAIKAKI ISHPHYSSLL 120 AAYLDCQKVG APPEVLARLT AVAQDLELRQ RTALGSLGTA TEPELDQFME AYHEMLVKYR 180 EELTRPLQEA MEFLRRVETQ LNSLSISGRS LRNILSSGSS EEDQEGSGGE TELPEIDAHG 240 VDQELKHHLL KKYSGYLSSL KQELSKKKKK GKLPKDARQQ LLSWWEMHYK WPYPSESQKV 300 ALAESTGLDL KQINNWFINQ RKRHWKPSDE MQFVMMDAYH PPNAAFYMDG HFVNDSGLYR 360 FG

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MEEIGHHFGL GATAHGQHHS QLPWGSSPLS AVIAPPPQQQ QQQQSAGYLA HSPLSLNTAP  60
PSGSHGGGTG CSNPVLQLAN GSLLEACAKA AKEPSSSSYA ADVEAIKAKI ISHPHYSSLL  120
AAYLDCQKVG APPEVLARLT AVAQDLELRQ RTALGSLGTA TEPELDQFME AYHEMLVKYR  180
EELTRPLQEA MEFLRRVETQ LNSLSISGRS LRNILSSGSS EEDQEGSGGE TELPEIDAHG  240
VDQELKHHLL KKYSGYLSSL KQELSKKKKK GKLPKDARQQ LLSWWEMHYK WPYPSESQKV  300
ALAESTGLDL KQINNWFINQ RKRHWKPSDE MQFVMMDAYH PPNAAFYMDG HFVNDSGLYR  360
FG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	3e-98	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG040170.3