PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG038200.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 418aa    MW: 47864.8 Da    PI: 6.6386
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG038200.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.51.5e-156831598
                      -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                      r ++p +f++++ g+   +++++l++++g s+++ +   k++++ vl++GW+ Fvk  +L   D vvF+++g+s+f   v vf+
  TRIDC4AG038200.7  6 RWIVPDEFLRRFRGE--IPREIRLQTRNGHSYTIGV--AKYPDKLVLQAGWETFVKTYDLHMDDCVVFRYKGNSQF--DVIVFD 83
                      5678********776..6779***************..**********************************9999..776666 PP
2B347.33.6e-15326406186
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+ v+ + +v+ ++ l+++kk++++h g+ke+   + l ++ g++W+v++  + + +   + +GW++Fvk+n++++gD+++F+l +
  TRIDC4AG038200.7 326 FVAVMRRFNVTGTCTLTFSKKYVQTHVGDKERR--ICL-QRCGKRWDVQF--SSSVEVKRIVSGWRKFVKDNDVETGDICIFELLK 406
                       5566777789999*************7787664..665.569********..5555556688*********************764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MTVVRRWIVP DEFLRRFRGE IPREIRLQTR NGHSYTIGVA KYPDKLVLQA GWETFVKTYD  60
LHMDDCVVFR YKGNSQFDVI VFDRFGREKA FSVIRDSAPP VQESHNSGTE NLDRSHGHSQ  120
PMEVQSPIEN ANHPEGRPQP MRMQPPTENA NPSHAHPQPM RMQPPTENLD DPVGFSPPTE  180
NVNNLFGHSQ PTQMQPSTEA VHHFAQMQPS TEAVDHSNGH ALTMQMQPSS EVVDHSNGHA  240
QTMQMQLFCR PTKLRQTMLQ WDYSSMGNET APSPSDTPRD SLSSEHDIEG CASPRYTLIY  300
NTSLNTVQKE EVDEQVKSIH KDNPIFVAVM RRFNVTGTCT LTFSKKYVQT HVGDKERRIC  360
LQRCGKRWDV QFSSSVEVKR IVSGWRKFVK DNDVETGDIC IFELLKIDEM CTMEVHII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-14B3 family protein