PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG038200.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 631aa    MW: 71836.1 Da    PI: 7.0076
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG038200.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.57.8e-16581361498
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       + +++p +f++++ g+   +++++l++++g s+++ +   k++++ vl++GW+ Fvk  +L   D vvF+++g+s+f   v vf+
  TRIDC4AG038200.6  58 QEMIVPDEFLRRFRGE--IPREIRLQTRNGHSYTIGV--AKYPDKLVLQAGWETFVKTYDLHMDDCVVFRYKGNSQF--DVIVFD 136
                       46899********776..6779***************..**********************************9999..776666 PP
2B3474.7e-15379470196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       f+ v+ + +v+ ++ l+++kk++++h g+ke+   + l ++ g++W+v++  + + +   + +GW++Fvk+n++++gD+++F+l +  +  ++
  TRIDC4AG038200.6 379 FVAVMRRFNVTGTCTLTFSKKYVQTHVGDKERR--ICL-QRCGKRWDVQF--SSSVEVKRIVSGWRKFVKDNDVETGDICIFELLKIdEMCTM 466
                       5566777789999*************7787664..665.569********..5555556688*********************7644354446 PP

                       EEEE CS
                B3  93 vvkv 96 
                        v++
  TRIDC4AG038200.6 467 EVHI 470
                       6666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    
DRRASRGSRR PGSQARPSPR SSEKMGCERC ERRDELDYCN LDDREKHFLM FIVDDCGQEM  60
IVPDEFLRRF RGEIPREIRL QTRNGHSYTI GVAKYPDKLV LQAGWETFVK TYDLHMDDCV  120
VFRYKGNSQF DVIVFDRFGR EKAFSVIRDS APPVQESHNS GTENLDRSHG HSQPMEVQSP  180
IENANHPEGR PQPMRMQPPT ENANPSHAHP QPMRMQPPTE NLDDPVGFSP PTENVNNLFG  240
HSQPTQMQPS TEAVHHFAQM QPSTEAVDHS NGHALTMQMQ PSSEVVDHSN GHAQTMQMQL  300
FCRPTKLRQT MLQWDYSSMG NETAPSPSDT PRDSLSSEHD IEGCASPRYT LIYNTSLNTV  360
QKEEVDEQVK SIHKDNPIFV AVMRRFNVTG TCTLTFSKKY VQTHVGDKER RICLQRCGKR  420
WDVQFSSSVE VKRIVSGWRK FVKDNDVETG DICIFELLKI DEMCTMEVHI IHAKDFDRPS  480
QIGGRSVDGW CKEATTKTVE PSHSRPQLVK MQLRNASVED SYSRPQPMEM QSPSKERKIR  540
VETVNSSLGN EGDSSMSEDS VTLTGCIGVH LRRIPLIQKK VVKQKVDLIG SEIPICVLVM  600
QKTNVTGRFA LVRSIFSYIL SFEANVLFFC A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-14B3 family protein