PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG037240.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 200aa    MW: 22001.5 Da    PI: 12.6687
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG037240.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26042.71.6e-13266160
            DUF260  1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamss 60
                      +C++C+vlr++C++ Cvl+p +     ++ q++++ +v+k+FG++ ++  l+a+p ++r+ + + 
  TRIDC4AG037240.3  2 SCNGCRVLRKGCSDACVLRPSIewidgAQPQANATVFVAKFFGRAGLVASLAAVPLHHRPGTYHH 66
                      6*********************9999888899**************************9877665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MSCNGCRVLR KGCSDACVLR PSIEWIDGAQ PQANATVFVA KFFGRAGLVA SLAAVPLHHR  60
PGTYHHLARR RRGRAARRLP ALALRRARRL HGARHGRPLR QRRHQHRQLL LPPLLAGELH  120
VRARQEAEQE QPRLRRRRRA AAGEAAGAGA GAAVVRAGPL PDALVVAAGR REARRRVGRV  180
LHHDVLRGSQ RRRGGGRGAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37540.12e-25LBD family protein