PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG037240.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 233aa    MW: 24029.2 Da    PI: 7.5657
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG037240.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26093.23e-292105199
            DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                       +C++C+vlr++C++ Cvl+p +     ++ q++++ +v+k+FG++ ++  l+a+p ++r+ +++sl+yeA+ r+ +Pv+Ga+g++++ +++l+
  TRIDC4AG037240.2   2 SCNGCRVLRKGCSDACVLRPSIewidgAQPQANATVFVAKFFGRAGLVASLAAVPLHHRPGMFRSLLYEACGRTINPVSGAIGLMWTSNWDLC 94 
                       6*********************9999888899************************************************************* PP

            DUF260  89 qlkaelallke 99 
                       q++ae++l+++
  TRIDC4AG037240.2  95 QAAAEAVLRGD 105
                       *****998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MSCNGCRVLR KGCSDACVLR PSIEWIDGAQ PQANATVFVA KFFGRAGLVA SLAAVPLHHR  60
PGMFRSLLYE ACGRTINPVS GAIGLMWTSN WDLCQAAAEA VLRGDSLRSL SAVPAAFTER  120
DMAGLYGNVG TNTGSSSSLH SSPENSTSAP ARKRSKNSPG CGAVGGQQQV KLPGPGPVLQ  180
SCELDLCLTP LSSPLAGGRR GGASDEYSTT TCCEEASGDA AEAGAPPLLN LFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.12e-54LBD family protein