PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG036450.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 676aa MW: 74889.8 Da PI: 7.0751

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG036450.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.3	1.8e-29	317	367	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC4AG036450.9 317 EKNVSLKVLQQYFAGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 367 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
DNLSNALQSV QLSTVQARTH PQVPLCITVA SIAQKRRVNI IVEITQYSTL QSLTRNQQSV 60 LTEILDVLKA VCHTHMLPLA LAWIPVCPNS NLNVSAEYGD QAIKFGLRNK DVLCVQESAC 120 YINDMRMHDF LRACAEHPLE KGQGVAGNAI LSNHPFFSSD VREYDMHDYP LVHHARKFGL 180 HAAVAIRLRS TYTGNDDYVL EFFLPLTCKV REEQQLLLDD ISMTMQRVCS SLRTVSDAEL 240 KENTIIMQSA IRCSSSDVSI NSCDQIDVSS EVKKYAKFEP GSTSENFQNC SSTGKNVSLT 300 VLQESTSDRL QIRSSTEKNV SLKVLQQYFA GSLKDAAKSI GVCPTTLKRI CRQHGISRWP 360 SRKIKKVNRS LQKIQNVIST VHGVEGEIKY DPATGCIVSS VSHTEESSMM MNVEHQSSDS 420 LPIECHKFQP DYDAYQREHL GQAVLHKAQN DKRSETHINL NPGGLCRNSN FGRTSKGPRC 480 QDASNSSYLT KEMISADGTD MWVEGAEQKN VVWNSISMPQ QCKIEIETDK SNTIVEQSLA 540 SSSSMTDCSS GGTSSDGTLK KCFKSRSVDG SNASIVVKAA YKDDTVRLKL LPSMKYENLL 600 EEIAKRLKLS VGAFQLKYKD DEDEWVILAS DADLQECLDV LDTTGSRIVK IQVRDVPCAT 660 RAASGSSSIS LVDRSG

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

DNLSNALQSV QLSTVQARTH PQVPLCITVA SIAQKRRVNI IVEITQYSTL QSLTRNQQSV  60
LTEILDVLKA VCHTHMLPLA LAWIPVCPNS NLNVSAEYGD QAIKFGLRNK DVLCVQESAC  120
YINDMRMHDF LRACAEHPLE KGQGVAGNAI LSNHPFFSSD VREYDMHDYP LVHHARKFGL  180
HAAVAIRLRS TYTGNDDYVL EFFLPLTCKV REEQQLLLDD ISMTMQRVCS SLRTVSDAEL  240
KENTIIMQSA IRCSSSDVSI NSCDQIDVSS EVKKYAKFEP GSTSENFQNC SSTGKNVSLT  300
VLQESTSDRL QIRSSTEKNV SLKVLQQYFA GSLKDAAKSI GVCPTTLKRI CRQHGISRWP  360
SRKIKKVNRS LQKIQNVIST VHGVEGEIKY DPATGCIVSS VSHTEESSMM MNVEHQSSDS  420
LPIECHKFQP DYDAYQREHL GQAVLHKAQN DKRSETHINL NPGGLCRNSN FGRTSKGPRC  480
QDASNSSYLT KEMISADGTD MWVEGAEQKN VVWNSISMPQ QCKIEIETDK SNTIVEQSLA  540
SSSSMTDCSS GGTSSDGTLK KCFKSRSVDG SNASIVVKAA YKDDTVRLKL LPSMKYENLL  600
EEIAKRLKLS VGAFQLKYKD DEDEWVILAS DADLQECLDV LDTTGSRIVK IQVRDVPCAT  660
RAASGSSSIS LVDRSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-116	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG036450.9