PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG036450.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 642aa MW: 71148.4 Da PI: 6.9697

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG036450.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.4	1.7e-29	283	333	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC4AG036450.10 283 EKNVSLKVLQQYFAGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 333 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 642 aa Download sequence
ILQSVQLSTV QARTHPQSLT RNQQSVLTEI LDVLKAVCHT HMLPLALAWI PVCPNSNLNV 60 SAEYGDQAIK FGLRNKDVLC VQESACYIND MRMHDFLRAC AEHPLEKGQG VAGNAILSNH 120 PFFSSDVREY DMHDYPLVHH ARKFGLHAAV AIRLRSTYTG NDDYVLEFFL PLTCKVREEQ 180 QLLLDDISMT MQRVCSSLRT VSDAELKENT IIMQSAIRCS SSDVSINSCD QIDVSSEVKK 240 YAKFEPGSTS ENFQNCSSTG KNVSLTVLQE STSDRLQIRS STEKNVSLKV LQQYFAGSLK 300 DAAKSIGVCP TTLKRICRQH GISRWPSRKI KKVNRSLQKI QNVISTVHGV EGEIKYDPAT 360 GCIVSSVSHT EESSMMMNVE HQSSDSLPIE CHKFQPDYDA YQREHLGQAV LHKAQNDKRS 420 ETHINLNPGG LCRNSNFGRT SKGPRCQDAS NSSYLTKEMI SADGTDMWVE GAEQKNVVWN 480 SISMPQQCKI EIETDKSNTI VEQSLASSSS MTDCSSGGTS SDGTLKKCFK SRSVDGSNAS 540 IVVKAAYKDD TVRLKLLPSM KYENLLEEIA KRLKLSVGAF QLKYKDDEDE WVILASDADL 600 QECLDVLDTT GSRIVKIQVR DVPCATRAAS GSSSISLVDR SG

Sequence ? help Back to Top

Protein Sequence Length: 642 aa Download sequence

ILQSVQLSTV QARTHPQSLT RNQQSVLTEI LDVLKAVCHT HMLPLALAWI PVCPNSNLNV  60
SAEYGDQAIK FGLRNKDVLC VQESACYIND MRMHDFLRAC AEHPLEKGQG VAGNAILSNH  120
PFFSSDVREY DMHDYPLVHH ARKFGLHAAV AIRLRSTYTG NDDYVLEFFL PLTCKVREEQ  180
QLLLDDISMT MQRVCSSLRT VSDAELKENT IIMQSAIRCS SSDVSINSCD QIDVSSEVKK  240
YAKFEPGSTS ENFQNCSSTG KNVSLTVLQE STSDRLQIRS STEKNVSLKV LQQYFAGSLK  300
DAAKSIGVCP TTLKRICRQH GISRWPSRKI KKVNRSLQKI QNVISTVHGV EGEIKYDPAT  360
GCIVSSVSHT EESSMMMNVE HQSSDSLPIE CHKFQPDYDA YQREHLGQAV LHKAQNDKRS  420
ETHINLNPGG LCRNSNFGRT SKGPRCQDAS NSSYLTKEMI SADGTDMWVE GAEQKNVVWN  480
SISMPQQCKI EIETDKSNTI VEQSLASSSS MTDCSSGGTS SDGTLKKCFK SRSVDGSNAS  540
IVVKAAYKDD TVRLKLLPSM KYENLLEEIA KRLKLSVGAF QLKYKDDEDE WVILASDADL  600
QECLDVLDTT GSRIVKIQVR DVPCATRAAS GSSSISLVDR SG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-118	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG036450.10