PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG032020.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 886aa MW: 95945.8 Da PI: 6.2123

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG032020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.1	0.00074	690	728	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a k s + Lek+v+++ Lq TRIDC4AG032020.1 690 RQLIQDRIKELREMVPNgA-----KQCSIDALLEKTVKHMLFLQ 728 67799**********66.....66888899****999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 886 aa Download sequence
MAVGEALRRL CEEIGWSYAV FWKAIGAADP VHLVWEDGYC GHTPCPAGSE ASQARAAELG 60 CSAAVDSICS LVRKDMAEQV HVVGEGTIGR VAFTGSHQWI IHGTADDHGL SSEVASEMHY 120 QFRAGIKTIA IIPVLPRGVL QLGSTGVVVE NTSFVMHAKK LCSQLNQRSS MAASASVKST 180 SNQSRPLHGA SNIQAADNSF SQFPVMREQY RRSDSATASS SKSLNASLFE AAQQNGLTGR 240 EHIVYGKPND MFLQQASYCD SRLGSNTLSA AISSDLVPSS LASVEQQQML MNTIGQLEFG 300 SGADLARSAL LKSLLYRNPF MHETSDMKLS HGRVGLSQGT TGHGSYGFLP GSAGVVSTTL 360 CTSSQVSEQG SHSSSGMLRQ KQPPVSCNVP QSSEFTMKMV RQERSSESAL PVSSQSDAQV 420 SNCLNGISQE NLLSRSGHMQ KDQNANRAND TRVAVSTQGV KNVDGCMLPA MPSETAHSLL 480 LQPTWDNDLF DIFGSEFHQL GHNVDANLVS SCDAKSHSLD RDAAEPSICL DSSSLFSSLD 540 NDFPCSGIFS LTDTDQLLDA VISNVNPSSK QSSDDNASCK TALTDIPNIS HFGLEELKQC 600 DSSGIPSTVI KNESTQIVRQ PYYFDKTEDG CLSQNNGAQK SQIRLWIENG QNMKCESASA 660 SNSKGLDTQS KSNRKRSRPG ESSKARPKDR QLIQDRIKEL REMVPNGAKQ CSIDALLEKT 720 VKHMLFLQSV TKHADKLKDS TESKILGSEN GPVWKDYFEG GATWAFDVGS QSMTCPIIVE 780 DLDRPRQMLV EMICEDRGIF LEIADFIKGL GLTILRGVME ARKSKIWARF TVEANRDVTR 840 MEIFLSLVRL LEPNCDGSGA VENPNSVNMP LGLVRQPVIP ATGGIQ

Sequence ? help Back to Top

Protein Sequence Length: 886 aa Download sequence

MAVGEALRRL CEEIGWSYAV FWKAIGAADP VHLVWEDGYC GHTPCPAGSE ASQARAAELG  60
CSAAVDSICS LVRKDMAEQV HVVGEGTIGR VAFTGSHQWI IHGTADDHGL SSEVASEMHY  120
QFRAGIKTIA IIPVLPRGVL QLGSTGVVVE NTSFVMHAKK LCSQLNQRSS MAASASVKST  180
SNQSRPLHGA SNIQAADNSF SQFPVMREQY RRSDSATASS SKSLNASLFE AAQQNGLTGR  240
EHIVYGKPND MFLQQASYCD SRLGSNTLSA AISSDLVPSS LASVEQQQML MNTIGQLEFG  300
SGADLARSAL LKSLLYRNPF MHETSDMKLS HGRVGLSQGT TGHGSYGFLP GSAGVVSTTL  360
CTSSQVSEQG SHSSSGMLRQ KQPPVSCNVP QSSEFTMKMV RQERSSESAL PVSSQSDAQV  420
SNCLNGISQE NLLSRSGHMQ KDQNANRAND TRVAVSTQGV KNVDGCMLPA MPSETAHSLL  480
LQPTWDNDLF DIFGSEFHQL GHNVDANLVS SCDAKSHSLD RDAAEPSICL DSSSLFSSLD  540
NDFPCSGIFS LTDTDQLLDA VISNVNPSSK QSSDDNASCK TALTDIPNIS HFGLEELKQC  600
DSSGIPSTVI KNESTQIVRQ PYYFDKTEDG CLSQNNGAQK SQIRLWIENG QNMKCESASA  660
SNSKGLDTQS KSNRKRSRPG ESSKARPKDR QLIQDRIKEL REMVPNGAKQ CSIDALLEKT  720
VKHMLFLQSV TKHADKLKDS TESKILGSEN GPVWKDYFEG GATWAFDVGS QSMTCPIIVE  780
DLDRPRQMLV EMICEDRGIF LEIADFIKGL GLTILRGVME ARKSKIWARF TVEANRDVTR  840
MEIFLSLVRL LEPNCDGSGA VENPNSVNMP LGLVRQPVIP ATGGIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	3e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG032020.1