PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG030910.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 196aa MW: 21341.2 Da PI: 7.5006 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 55.9 | 8.8e-18 | 42 | 99 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-S.SSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversa.edpkvveitYegeHnhe 59 dDg++WrKYG K+ +s+fpr Y+ t +Cp++k+v++++ +dp ++++tY ++H ++ TRIDC4AG030910.2 42 DDGHQWRKYGEKKLSNSNFPRCTYK-TDLKCPATKQVQQKDmSDPPLFTVTYFNHHSCN 99 8********************9999.788********976438*************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MALDSVPSYP SDLGSSGRAT RTQQRIRKEE RTWTADTYAP YDDGHQWRKY GEKKLSNSNF 60 PRCTYKTDLK CPATKQVQQK DMSDPPLFTV TYFNHHSCNT TSRPIGSAPD TTEQSSSRRA 120 VSICFGSHAT GEQPTFLTSP GTLQSPASTT NQQNDRGAYD HQFQWTDTSP SAGDAPVKME 180 TDSLAGTGAS SGAASG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 2e-16 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG030910.2 |