PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG030480.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 600aa    MW: 64429.2 Da    PI: 6.4237
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG030480.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS412.63.5e-1262295932374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsPil 91 
                        +lLl+cAe v+s+dl +aq++L ++ ela+p g+++qR+aayf+eA++arl++s+ +ly+ lp  +++  +    s+++aa+++f+ +sP++
  TRIDC4AG030480.3 229 LTLLLQCAESVNSDDLDEAQRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPNASSPAASrlvNSRVAAAFQVFNGISPFV 321
                       579************************************************************77666655568788899999********** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kfsh+taNqaI ea+e+e+rvHi+D+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s e+le+tg+rL++fA++lg+pfef + va 
  TRIDC4AG030480.3 322 KFSHFTANQAIQEAFEREDRVHIVDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMEALEATGKRLSDFAHTLGLPFEFYP-VAG 409
                       **********************************************************....***************************.799 PP

              GRAS 185 rledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                       +  +l++e+L v++  +Ea+aV++ +  h+l+d +++ ++    +L+l+++l Pkvv++veq+++h s+sFl+rf+ea++yysalfdsl+a++
  TRIDC4AG030480.3 410 KAGNLDPEKLGVDTrrREAVAVHWLH--HSLYDVTGNDSN----TLNLIQRLAPKVVTMVEQDLSH-SGSFLARFVEAIHYYSALFDSLDASY 495
                       **********999888*********9..999988888888....**********************.899*********************** PP

              GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
                       +++s+er++vE++ll+rei+nv+a  g +r+ + + +++Wre+l ++GF++++l  +aa+qa+lll +++sdgy++ ee+g+l lgWkd  L+
  TRIDC4AG030480.3 496 SEDSSERHVVEQQLLAREIRNVLAVGGPARTGDIK-FGNWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGTLKLGWKDLCLL 587
                       *****************************999987.********************************************************* PP

              GRAS 369 svSaWr 374
                       ++SaWr
  TRIDC4AG030480.3 588 TASAWR 593
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    
MVRKRPAPDV DLPPPRRHVT GDLSDVTAAT GGAAPPQQLP SAVAGSAQLP ALPMQLPAFG  60
GHLQAPVPAM DVVVAPQVAT EVNVNNDSTA WVDGIIRDII GSSGAAVSVA QLIHNVREII  120
HPCNPGLASL LELRLRSLLA SDLVQHPPPP PPLPPHHPLP ALPPPPPPDK RRREEEQQNP  180
PPQSPKPPPS AEETAAAAAA AAAAASAALK ERKEEQRRRQ RDEEGLHLLT LLLQCAESVN  240
SDDLDEAQRA LLEIAELATP FGTSTQRVAA YFAEAMSARL VSSCLGLYAP LPNASSPAAS  300
RLVNSRVAAA FQVFNGISPF VKFSHFTANQ AIQEAFERED RVHIVDLDIM QGLQWPGLFH  360
ILASRPGGPP RVRLTGLGAS MEALEATGKR LSDFAHTLGL PFEFYPVAGK AGNLDPEKLG  420
VDTRRREAVA VHWLHHSLYD VTGNDSNTLN LIQRLAPKVV TMVEQDLSHS GSFLARFVEA  480
IHYYSALFDS LDASYSEDSS ERHVVEQQLL AREIRNVLAV GGPARTGDIK FGNWREKLAQ  540
SGFRAASLAG SAAAQASLLL GMFPSDGYTL VEENGTLKLG WKDLCLLTAS AWRPFQALGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein