PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028400.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 649aa    MW: 72707.8 Da    PI: 5.2003
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028400.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS315.71e-962706402373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       + lLl cA+ v++g+ + a +lL++++++as +gd+ qRla +f+++L+arla+++s++yk+l +++ts   + e l+ ++lf  ++ + +++
  TRIDC4AG028400.1 270 RGLLLCCAQEVATGNRHGAGNLLKQIRQHASATGDAAQRLAYCFAKGLEARLAGTGSQVYKSLMAKHTS---TMEFLKGYELFMAACSFKRVA 359
                       679*************************************************************99999...899****************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +     +I +aveg++++Hi+D+++ +G QWp Ll  La+R++gpp++RiTg++ p++g   +++leetg+ L++ A+++g+pf+f++ +a +
  TRIDC4AG028400.1 360 FTFSSMTIFDAVEGKSKLHIVDYGLHYGCQWPGLLAWLATRDGGPPEVRITGIDLPQPGfrPAKRLEETGRALSNCARQFGLPFKFHA-IAAK 451
                       **********************************************************9*****************************.799* PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       +e+++ e+L+++p+E+l+Vn  ++  +l+des+ ++   +rd vL+ +++++P+v+v    + +  ++ Fl+rf eal +ys++fd+l+++ p
  TRIDC4AG028400.1 452 WETIRAEDLNIDPDEVLVVNDLFNFNTLMDESLVIDRpsPRDVVLSNIREMQPDVFVQGVVNGSS-GPFFLARFREALFFYSSVFDMLDTTTP 543
                       ********************************98877669****************999888776.89************************* PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       +es er ++Er ++g+ + n +ace a+r+er et+++W+ r ++a ++++pl+  ++k a   ++  + +++ v+ ++g+l++gWk+r L++
  TRIDC4AG028400.1 544 PESYERFVLERDMFGQCALNTIACESADRVERPETYKQWQLRNQRASLRQLPLKPIITKVATGKVKSLYHKEFVVDVDQGWLLQGWKGRILYA 636
                       *********************************************************************999********************* PP

              GRAS 370 vSaW 373
                        SaW
  TRIDC4AG028400.1 637 HSAW 640
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 649 aa     Download sequence    
MPIAPEELLG LKEHMEPPPP SPSVYLDIPP SPYGGSVGDL VLPYITRMLM EEDIDDRFFY  60
QYPDHLAFLQ AQQQFTQILD DAKNLLSGEG GDMEKMHSDA SLQGIRGGSM CLADKDVPSW  120
TFSDGAEVYN NGDQSKLNRS NEAMLNFAFL KGMEEANKFL PRDNQPQADV FSVDQAKEIF  180
GRSISGGGRK GQRDVDKLEE VVGRASKLLM PELEEDGASE MINKIMLNSY ELCGETMEEL  240
QITMENIRAD RKNKKAVRGK QGKKEAVDLR GLLLCCAQEV ATGNRHGAGN LLKQIRQHAS  300
ATGDAAQRLA YCFAKGLEAR LAGTGSQVYK SLMAKHTSTM EFLKGYELFM AACSFKRVAF  360
TFSSMTIFDA VEGKSKLHIV DYGLHYGCQW PGLLAWLATR DGGPPEVRIT GIDLPQPGFR  420
PAKRLEETGR ALSNCARQFG LPFKFHAIAA KWETIRAEDL NIDPDEVLVV NDLFNFNTLM  480
DESLVIDRPS PRDVVLSNIR EMQPDVFVQG VVNGSSGPFF LARFREALFF YSSVFDMLDT  540
TTPPESYERF VLERDMFGQC ALNTIACESA DRVERPETYK QWQLRNQRAS LRQLPLKPII  600
TKVATGKVKS LYHKEFVVDV DQGWLLQGWK GRILYAHSAW VADDTSSEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-140GRAS family protein