PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028370.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 573aa    MW: 64592.3 Da    PI: 6.2087
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028370.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS323.44.6e-991955642373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av + d + a +lL++++++asp+gd++qRla  f+e+L+arl++++s++y  l+++ ts   ++++++a++lf  ++ + k++
  TRIDC4AG028370.4 195 HTLLIHCAKAVMD-DRRSAGELLKEIKQHASPTGDATQRLAYWFAEGLEARLTSTGSQVYGLLTAECTS---TVRHMQAYQLFMSTCCFRKVA 283
                       679********97.8999******************************************999998888...899****************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +l aN+aI +a+ g +r+Hi+D+++  G+QWp Ll+ LasR++gpp++RiT ++ p +g   ++ +e++g+rL+++A+elgvpf++++ ++ +
  TRIDC4AG028370.4 284 FLFANKAIFNAAVGRSRLHIVDYGLHCGFQWPELLRWLASRDGGPPEVRITHIELPLPGvyPEKHMEQIGNRLTDIAQELGVPFKYRA-IMAQ 375
                       ********************************************************99999***************************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       ++++ +e+L+ +p+EalaVn +++  +l+desv ++s  +rd+vL  + +++P+v+v +  + ++ ++ Fl rf eal y+salfd+l+a++p
  TRIDC4AG028370.4 376 WQTICVEDLDKEPDEALAVNDQFNFRTLMDESVVIASpnPRDAVLGNISKMKPDVFVQSTVNGSY-GTFFLSRFREALFYHSALFDMLDATMP 467
                       *********************************9998889***********************99.789************************ PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       res+ r  +Er ++g+ + n+va eg++r+er et+++W+ r ++aG++++pl+ +++k a  ++   + + + ++e++++l++gWk+r L++
  TRIDC4AG028370.4 468 RESKLRLALERDVFGWMVLNAVAYEGEDRVERGETYKHWQIRNQRAGLRQLPLNRETVKMATDMVMGDYHKDFDIDEDHQWLLQGWKGRILYA 560
                       **********************************************************99998888877677********************* PP

              GRAS 370 vSaW 373
                        S W
  TRIDC4AG028370.4 561 HSTW 564
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    
MADDDSNCFA VQDHLALPYI TQILMKEEDD VDEDSPALLK AQRPFAQILS SSMHASTLMA  60
DQGGALAIDV HSPSSPIFKF KGVDEVHSLM LLPDADYSTH MFSIAFLRGM EEANKFLPRN  120
CELTTTGGHD QPKEKSGRGR KDRHGEVEAD VSRTSRLVEV GAGEVFDQML IAHGNETGNS  180
NKKGRKSKTR VVDLHTLLIH CAKAVMDDRR SAGELLKEIK QHASPTGDAT QRLAYWFAEG  240
LEARLTSTGS QVYGLLTAEC TSTVRHMQAY QLFMSTCCFR KVAFLFANKA IFNAAVGRSR  300
LHIVDYGLHC GFQWPELLRW LASRDGGPPE VRITHIELPL PGVYPEKHME QIGNRLTDIA  360
QELGVPFKYR AIMAQWQTIC VEDLDKEPDE ALAVNDQFNF RTLMDESVVI ASPNPRDAVL  420
GNISKMKPDV FVQSTVNGSY GTFFLSRFRE ALFYHSALFD MLDATMPRES KLRLALERDV  480
FGWMVLNAVA YEGEDRVERG ETYKHWQIRN QRAGLRQLPL NRETVKMATD MVMGDYHKDF  540
DIDEDHQWLL QGWKGRILYA HSTWVAEGAS SHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-126GRAS family protein