PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028370.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 630aa    MW: 71293.5 Da    PI: 10.1925
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028370.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS337.91.8e-1032536242373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lLl+c++a+s+++ + a++lL+r++++++p+gd+ qRla+yf+eAL arla+ +sely++l +++ts   +++ l+a +l+  ++ + k++
  TRIDC4AG028370.1 253 HTLLLNCVQALSTDNRRTASELLKRIRQHSTPKGDAAQRLAHYFAEALDARLAGRGSELYQSLMARRTS---VADFLKANQLYMAACCCKKVA 342
                       679**************************************************************9999...********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++ aN++I +av g++r+Hi+D+++sqGlQWp Ll  La+R++gpp+++iTg++ p++g   +  +eetg+rL++fA+ +gvpf+f+  +a +
  TRIDC4AG028370.1 343 FIFANKTICNAVVGKSRLHIVDYGLSQGLQWPGLLCMLAAREGGPPEVKITGIDLPQPGfqGAYHIEETGRRLSNFARVFGVPFKFHG-IAAK 434
                       **********************************************************9989999***********************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        e++++e+L+++++E+l+V +  +   l+de++ l+   +rd+vL+ +++++P+v+++   + +++++ Fl+rf eal  ysa fd l+a++p
  TRIDC4AG028370.1 435 RETVQPEDLSIDRDEVLVVISLCHFRLLMDENLGLDTpsPRDQVLNNIRKMRPDVFIHGIMNGSYGATYFLTRFREALFNYSAQFDLLDATVP 527
                       9**********************99999999987665559***************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       r++e r  +Er ++gr++ nv+aceg++r+er et+++W+ r ++aG++++pl+ +++  +   ++  + + + v+e++ +l+  Wk+r L++
  TRIDC4AG028370.1 528 RDNEGRLLLERDIFGRSALNVIACEGSDRVERPETYKQWQLRNHRAGLRQLPLNPDVVRLVLDKVKDNYHKDFVVDEDQRWLLHRWKGRVLYA 620
                       ******************************************************************999888********************* PP

              GRAS 370 vSaW 373
                       +S W
  TRIDC4AG028370.1 621 LSTW 624
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 630 aa     Download sequence    
EQWPPRRRNS WGSRVSFRGW SRPRRPCSSA CRRRPAAWRT GTPRLTTWRC PTSRACWRRT  60
WRTTSSTCTP TTPRSSGRSC PSRRSSSTSP TAPAAPPPRS RRPSPPPPST PEAQNPSSDF  120
VIGNYLLPGD QDMLNLAFLK GMEEARKFLP PNSSLPAMKV DQVVAGVHAG AGLKKKRDTL  180
EPDMGRASKL MMPEQEEDGA RELFDEMMFQ EHEICMKGVQ QLRVAVDSEP GKNRRKKGRP  240
RRDSSDSEMV DLHTLLLNCV QALSTDNRRT ASELLKRIRQ HSTPKGDAAQ RLAHYFAEAL  300
DARLAGRGSE LYQSLMARRT SVADFLKANQ LYMAACCCKK VAFIFANKTI CNAVVGKSRL  360
HIVDYGLSQG LQWPGLLCML AAREGGPPEV KITGIDLPQP GFQGAYHIEE TGRRLSNFAR  420
VFGVPFKFHG IAAKRETVQP EDLSIDRDEV LVVISLCHFR LLMDENLGLD TPSPRDQVLN  480
NIRKMRPDVF IHGIMNGSYG ATYFLTRFRE ALFNYSAQFD LLDATVPRDN EGRLLLERDI  540
FGRSALNVIA CEGSDRVERP ETYKQWQLRN HRAGLRQLPL NPDVVRLVLD KVKDNYHKDF  600
VVDEDQRWLL HRWKGRVLYA LSTWVADNAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-135GRAS family protein