PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028350.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 689aa    MW: 76476.6 Da    PI: 6.7651
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028350.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS333.73.3e-1023126832373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lLl+cA+a+s+++ + a +lL+r+++++sp+gd+ qRla+yf+++L+arla+ +sely++l  s+ s   +++ l+a +l+  ++ + k++
  TRIDC4AG028350.1 312 HTLLLNCAQALSTDNRQSAIELLKRIRQHSSPKGDAGQRLAHYFANGLEARLAGRGSELYQSLLLSRIS---VADFLKANQLYTAACCCKKVA 401
                       679************************************************************999998...********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++ a ++I +av+g++r+Hi+D++++qGlQWp Ll+ La+R++gpp++RiTg++ p++g   +  +eetg+rL++fA+ +gvpf+f+  +  +
  TRIDC4AG028350.1 402 YIFADKTICNAVAGKRRLHIVDYGLNQGLQWPGLLRMLAAREGGPPEVRITGIDLPQPGfhGAYHIEETGRRLSNFARVFGVPFKFRG-IPAK 493
                       **********************************************************999999************************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        e++++e+L+++++E+l+V +  +  +l+des+  +   +rd+vL+ +++++P+v+++   + +++++sFl+rf eal +ysa fd l++++p
  TRIDC4AG028350.1 494 RETVRPEDLNIDRDEVLVVISLCHFRHLMDESLGFDGpsPRDQVLNNIRKMRPDVFIHGIMNGSYGATSFLTRFREALFHYSAQFDLLDTTAP 586
                       9*******************************98876669***************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       r++e r  +Er ++gr+  nv+acega+r+er et+++W+ r ++aG++++pl+ +++k +   ++  + + + v+ ++ +l+  Wk+r L++
  TRIDC4AG028350.1 587 RDNEGRLLLERDIFGRSCLNVLACEGADRVERPETYKQWQLRNHRAGLRQLPLNPEVVKLVLDKVKDNYHRNFVVDADQRWLLHRWKGRVLYA 679
                       *********************************************************************999********************* PP

              GRAS 370 vSaW 373
                        S+W
  TRIDC4AG028350.1 680 WSSW 683
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 689 aa     Download sequence    
LLYSSVKYLP ARSAMAATPE EFLGQQGFLA RLEPPSPSLF LDLPPTPRDD DGHSSFDDMV  60
LPYISRLLME EGTEDHLFYL YPNHPAVLRA QQPFAQILVD LADSASASGS TSSPSSSSDA  120
TASTTPSTAT ASASASASPD DAPVQISRPP YTDVNGHASA SPDNHSPGLL NGDEMAKRPS  180
SDLFNHLLPR DEDMLNLAFL KGMEEASKFL PPDITLSINE GTVVGGGNAV SLNNKKRAAL  240
ALEPDVGRPS KLMMPEQEER KMFDEMMFQE HEICMKGTQN LTAAVDGEPG KNSRKNGRSR  300
KAVDDSEMVD LHTLLLNCAQ ALSTDNRQSA IELLKRIRQH SSPKGDAGQR LAHYFANGLE  360
ARLAGRGSEL YQSLLLSRIS VADFLKANQL YTAACCCKKV AYIFADKTIC NAVAGKRRLH  420
IVDYGLNQGL QWPGLLRMLA AREGGPPEVR ITGIDLPQPG FHGAYHIEET GRRLSNFARV  480
FGVPFKFRGI PAKRETVRPE DLNIDRDEVL VVISLCHFRH LMDESLGFDG PSPRDQVLNN  540
IRKMRPDVFI HGIMNGSYGA TSFLTRFREA LFHYSAQFDL LDTTAPRDNE GRLLLERDIF  600
GRSCLNVLAC EGADRVERPE TYKQWQLRNH RAGLRQLPLN PEVVKLVLDK VKDNYHRNFV  660
VDADQRWLLH RWKGRVLYAW SSWIAADAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-135GRAS family protein