PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028340.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 768aa    MW: 84853.8 Da    PI: 6.3898
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028340.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3312.2e-1013837581373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd++  ++lL ++++++sp+gd++qRla +f+e+L+arla+++s++y++l +++ts   + e l a+kl+  +s + k+
  TRIDC4AG028340.3 383 LRTMLIHCAQAVATGDHRGSNELLRQIKQHSSPKGDATQRLAYCFAEGLEARLAGTGSHVYRSLVAKSTS---VGEFLRAYKLYMAASSFRKV 472
                       5789***************************************************************999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        ++   + I++a+ g++r+Hi+D+++++G+QWp Llq La+R++gpp++RiTg++ p++g   + ++eetg+rL+k A+e+gvpf+++  +  
  TRIDC4AG028340.3 473 NFIFVGKIIMDAMVGKSRLHIVDYNVEYGFQWPDLLQMLAEREGGPPEVRITGIDVPQPGfrPAFQIEETGRRLSKCAQEFGVPFRYHG-IPA 564
                       ***********************************************************999***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +le+++ e+L+++p+E+l+V ++    +l+desv ++      +rd vL  +++++P+v++ +  +  ++++ F++rf eal +ysa fd+l+
  TRIDC4AG028340.3 565 KLETVHAEDLNIDPNEVLIVTSQCGFSNLMDESVIMDRqdipsPRDMVLTNIRNMRPDVFIDCVVNGTYSAPFFVTRFREALFTYSAQFDMLD 657
                       ******************************99887665555669************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       a++pr++++r  +Er ++g+ + nv+acega+r+ r et+++W+ r ++aG+++vpls+ ++k +k  ++  + + + ++ ++ +l++gWk+r
  TRIDC4AG028340.3 658 ATIPRDNDDRLLIERDIFGPCALNVIACEGADRVDRPETYKQWQVRGHRAGLRQVPLSSAVVKLVKDKVKSLYHKDFLIDVDNRWLLQGWKGR 750
                       *************************************************************************888***************** PP

              GRAS 366 pLvsvSaW 373
                        L+++S W
  TRIDC4AG028340.3 751 VLYAMSTW 758
                       ******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    
MAATPDEFLR AGDAEPFSPS LFLDLPPTPS PPRAPASDDL DFISRMLMEE DIDDRFFYQY  60
PDHPAILSAQ HRFAQIISDS NTNPSTDDSA VASSNTANST SCSPSPGGFG PANPTWPYER  120
IDLSQPLHSP PYIGLGFPVD GANNLLFSGV STPTSGYFGH TPALSRGNSN HFVAPAGQNG  180
RSTGIQSFAT FSNSSATKDA KTLSNNATAK AAKPATQAAC RGGPGTPASA FFFNGQTDGD  240
MDMLNMAFRK GMEEANKFLP TNNTLDAISN RPALRDLTCD QLKKEEADRL RMLMFSNGRG  300
RKNRHGVEDL EAEAGRRSKL MMPEQEESGV GEMVEEIMLH GHDIIMKGIE DLQIAMGTEA  360
EKNHRKGTGK AARGRRGATE VDLRTMLIHC AQAVATGDHR GSNELLRQIK QHSSPKGDAT  420
QRLAYCFAEG LEARLAGTGS HVYRSLVAKS TSVGEFLRAY KLYMAASSFR KVNFIFVGKI  480
IMDAMVGKSR LHIVDYNVEY GFQWPDLLQM LAEREGGPPE VRITGIDVPQ PGFRPAFQIE  540
ETGRRLSKCA QEFGVPFRYH GIPAKLETVH AEDLNIDPNE VLIVTSQCGF SNLMDESVIM  600
DRQDIPSPRD MVLTNIRNMR PDVFIDCVVN GTYSAPFFVT RFREALFTYS AQFDMLDATI  660
PRDNDDRLLI ERDIFGPCAL NVIACEGADR VDRPETYKQW QVRGHRAGLR QVPLSSAVVK  720
LVKDKVKSLY HKDFLIDVDN RWLLQGWKGR VLYAMSTWVA GDHDISKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-139GRAS family protein