PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG028340.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 528aa MW: 59720.4 Da PI: 7.3816 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 332.5 | 7.7e-102 | 143 | 518 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 l++ L++cA+av++gd++ ++lL ++++++sp+gd++qRla +f+e+L+arla+++s++y++l +++ts + e l a+kl+ +s + k+ TRIDC4AG028340.2 143 LRTMLIHCAQAVATGDHRGSNELLRQIKQHSSPKGDATQRLAYCFAEGLEARLAGTGSHVYRSLVAKSTS---VGEFLRAYKLYMAASSFRKV 232 5789***************************************************************999...9******************* PP GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184 ++ + I++a+ g++r+Hi+D+++++G+QWp Llq La+R++gpp++RiTg++ p++g + ++eetg+rL+k A+e+gvpf+++ + TRIDC4AG028340.2 233 NFIFVGKIIMDAMVGKSRLHIVDYNVEYGFQWPDLLQMLAEREGGPPEVRITGIDVPQPGfrPAFQIEETGRRLSKCAQEFGVPFRYHG-IPA 324 ***********************************************************999***************************.799 PP GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272 +le+++ e+L+++p+E+l+V ++ +l+desv ++ +rd vL +++++P+v++ + + ++++ F++rf eal +ysa fd+l+ TRIDC4AG028340.2 325 KLETVHAEDLNIDPNEVLIVTSQCGFSNLMDESVIMDRqdipsPRDMVLTNIRNMRPDVFIDCVVNGTYSAPFFVTRFREALFTYSAQFDMLD 417 ******************************99887665555669************************************************* PP GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365 a++pr++++r +Er ++g+ + nv+acega+r+ r et+++W+ r ++aG+++vpls+ ++k +k ++ + + + ++ ++ +l++gWk+r TRIDC4AG028340.2 418 ATIPRDNDDRLLIERDIFGPCALNVIACEGADRVDRPETYKQWQVRGHRAGLRQVPLSSAVVKLVKDKVKSLYHKDFLIDVDNRWLLQGWKGR 510 *************************************************************************888***************** PP GRAS 366 pLvsvSaW 373 L+++S W TRIDC4AG028340.2 511 VLYAMSTW 518 ******** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 528 aa Download sequence |
MDMLNMAFRK GMEEANKFLP TNNTLDAISN RPALRDLTCD QLKKEEADRL RMLMFSNGRG 60 RKNRHGVEDL EAEAGRRSKL MMPEQEESGV GEMVEEIMLH GHDIIMKGIE DLQIAMGTEA 120 EKNHRKGTGK AARGRRGATE VDLRTMLIHC AQAVATGDHR GSNELLRQIK QHSSPKGDAT 180 QRLAYCFAEG LEARLAGTGS HVYRSLVAKS TSVGEFLRAY KLYMAASSFR KVNFIFVGKI 240 IMDAMVGKSR LHIVDYNVEY GFQWPDLLQM LAEREGGPPE VRITGIDVPQ PGFRPAFQIE 300 ETGRRLSKCA QEFGVPFRYH GIPAKLETVH AEDLNIDPNE VLIVTSQCGF SNLMDESVIM 360 DRQDIPSPRD MVLTNIRNMR PDVFIDCVVN GTYSAPFFVT RFREALFTYS AQFDMLDATI 420 PRDNDDRLLI ERDIFGPCAL NVIACEGADR VDRPETYKQW QVRGHRAGLR QVPLSSAVVK 480 LVKDKVKSLY HKDFLIDVDN RWLLQGWKGR VLYAMSTWVA GDHDISKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 1e-142 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG028340.2 |