PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG027860.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 173aa    MW: 19707.4 Da    PI: 7.8074
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG027860.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.89e-17243548
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +++E+ l++++++++G++ W++Iar+++ gRt++++k++w++++
  TRIDC4AG027860.6  2 SPQEEHLIIELHARWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 43
                      89****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MSPQEEHLII ELHARWGNRW SRIARRLPGR TDNEIKNYWR THMRKKAQER KIDMSPSSSS  60
SSFTYQSCLL ETAPIIRMDG GSTHNGTTCF SSVLKSNQSV MDGYSMDQIW KEIEAPAMLP  120
IDDKACSNLP CPLLPSPMGD RYCPPEVVWK MDNGDLKMLA PQFGYGNGER SCY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.17e-32MYB_related family protein