PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG027860.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 241aa    MW: 27509.3 Da    PI: 8.5852
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG027860.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.11.1e-14271548
                      -HHHHHHHHHHHHHTTTT...........................-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  5 TteEdellvdavkqlGgg...........................tWktIartmgkgRtlkqcksrwqkyl 48
                      +++E+ l++++++++G++                           +W++Iar+++ gRt++++k++w++++
  TRIDC4AG027860.3  2 SPQEEHLIIELHARWGNRfdtkedltkaaffhlqqmkrtntlsmyRWSRIARRLP-GRTDNEIKNYWRTHM 71
                      89*****************************************************.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MSPQEEHLII ELHARWGNRF DTKEDLTKAA FFHLQQMKRT NTLSMYRWSR IARRLPGRTD  60
NEIKNYWRTH MRKKAQERKI DMSPSSSSSS FTYQSCLLET APIIRMDGGS THNGTTCFSS  120
VLKSNQSVMD GYSMDQIWKE IEAPAMLPID DKACSNLPCP LLPSPMGDRY CPPEVVWKMD  180
NGDLKMLAPQ FGYGNGERSC SPTVDVAHAE KELPSSPAPT RREQGFRNKR EREPAGIGLF  240
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.11e-25MYB_related family protein