PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG027670.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 195aa MW: 21513.8 Da PI: 5.5107 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.9 | 2.7e-09 | 6 | 27 | 24 | 46 |
HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46 W++Ia++++ gRt++++k++w++ TRIDC4AG027670.2 6 WSKIAQHLP-GRTDNEIKNYWRT 27 *********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MMGAWWSKIA QHLPGRTDNE IKNYWRTRVQ KHAKQLNCDV GSATFKDAMR YLWMPRLVER 60 IHAAAGDPTI GDTSCASGVR SMATTAATAT TYPENNSAAS AVTTSRSASS GSFTSELCGE 120 EKNLHVHGSG EKTTSGGDWM QEADQEFWAM HMQIQPEDGG LFHVDHELSG WVQGFSDVGV 180 SADNLWSLED IWKMQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 2e-33 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG027670.2 |