PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4AG024620.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 259aa MW: 27978.4 Da PI: 6.3988 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.8 | 3e-30 | 110 | 166 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK vkg e+prsYY+Ct+a+Cpvkkkve+sa +++++i+Y+g+Hnh+ TRIDC4AG024620.4 110 DDGYNWRKYGQKAVKGGEYPRSYYKCTQASCPVKKKVEHSA-YGQITQIIYRGQHNHQ 166 8****************************************.9**************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 259 aa Download sequence |
GLSPTALLGP PSLFSPTANF EMSHQQALAQ VTAQAVHSQY TVGSQADYSL PFSSATTSAL 60 TSQFINSSAN VTSMKETATL PLHTVNDNLK SNEVSQGFQT SALTVDKPAD DGYNWRKYGQ 120 KAVKGGEYPR SYYKCTQASC PVKKKVEHSA YGQITQIIYR GQHNHQRPPK RRSKDGGNLL 180 NEDDFPENRD ALTRSEPGSQ DHSGKVEVSN DGITGPSVSK RRGGGDQSSG SSDTEEDNDE 240 AGDDNGDAGI VNANKRWFM |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 167 | 172 | RPPKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G13960.1 | 2e-37 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4AG024620.4 |