PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG024620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 444aa MW: 48594.7 Da PI: 9.5997 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.6 | 7.1e-30 | 162 | 218 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK vkg e+prsYY+Ct+a+Cpvkkkve+sa +++++i+Y+g+Hnh+ TRIDC4AG024620.1 162 DDGYNWRKYGQKAVKGGEYPRSYYKCTQASCPVKKKVEHSA-YGQITQIIYRGQHNHQ 218 8****************************************.9**************8 PP | |||||||
2 | WRKY | 102.3 | 2.7e-32 | 328 | 386 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC vkk++er+++dp++v++tYeg+H h+ TRIDC4AG024620.1 328 LDDGYRWRKYGQKVVKGNPHPRSYYKCTYQGCDVKKHIERCSQDPTAVITTYEGKHSHD 386 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 444 aa Download sequence |
RDQPRPVHPR RRALPGYALL GLPRLLHPAP CRRHGLPSRT PFPSLTVRRA TGAQPHRSPR 60 PPFALLPYEA NFEMSHQQAL AQVTAQAVHS QYTVGSQADY SLPFSSATTS ALTSQFINSS 120 ANVTSMKETA TLPLHTVNDN LKSNEVSQGF QTSALTVDKP ADDGYNWRKY GQKAVKGGEY 180 PRSYYKCTQA SCPVKKKVEH SAYGQITQII YRGQHNHQRP PKRRSKDGGN LLNEDDFPEN 240 RDALTRSEPG SQDHSGKVEV SNDGITGPSV SKRRGGGDQS SGSSDTEEDN DEAGDDNGDA 300 GIVNANKRHV PAPAQRIIVQ TTSEIDLLDD GYRWRKYGQK VVKGNPHPRS YYKCTYQGCD 360 VKKHIERCSQ DPTAVITTYE GKHSHDVPAA RSSVAAAASA NASSSISLLH RGQKAASSSQ 420 RVLPRAALHT SDSSLQLKEE NEIT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 219 | 224 | RPPKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13960.1 | 8e-73 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG024620.1 |