PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG019550.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GeBP

Protein Properties

Length: 348aa MW: 38203.9 Da PI: 5.1919

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG019550.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	107.9	7.2e-34	67	166	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkife 90 lfqrlw+eeDeiv+L+++ +f+a++g+ +++ d++ fye +++++++++sksql eK+rrLK+K++++v++ + sg+ +sf+++h+q +fe TRIDC4AG019550.1 67 LFQRLWTEEDEIVILRAFAEFTAQRGTafASHQyDTEPFYEEMRRRLQLDFSKSQLAEKLRRLKRKYRNCVERlRCSGNTFSFRSPHEQAVFE 159 79***********************9977778***********************************8889************ PP DUF573 91 lskkiWg 97 +++ iW+ TRIDC4AG019550.1 160 IARNIWR 166 ****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MLPMVDDPSA AGAAASSSFP DADAYGNGDS EDIEFPVDPI PNPPFSSSAP VAAPASATAT 60 VGERRPLFQR LWTEEDEIVI LRAFAEFTAQ RGTAFASHQY DTEPFYEEMR RRLQLDFSKS 120 QLAEKLRRLK RKYRNCVERL RCSGNTFSFR SPHEQAVFEI ARNIWRPSSD KHGRDPNAAD 180 SEDDATITGT NAAANGDAKS PSSSKAHRRG RRRRTADLAA DASEGPQPYI SGPMPVKTED 240 SLPAFFPQVS MDGAEPVVAP VVNTESSVLT PLFKEMVRAM LGIGGCPSPL GLGAKVREQP 300 SAVLGIPMEG EKWRQQRILE LEVYLRRIDL LQDEVKSALE ELKSTPPT

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MLPMVDDPSA AGAAASSSFP DADAYGNGDS EDIEFPVDPI PNPPFSSSAP VAAPASATAT  60
VGERRPLFQR LWTEEDEIVI LRAFAEFTAQ RGTAFASHQY DTEPFYEEMR RRLQLDFSKS  120
QLAEKLRRLK RKYRNCVERL RCSGNTFSFR SPHEQAVFEI ARNIWRPSSD KHGRDPNAAD  180
SEDDATITGT NAAANGDAKS PSSSKAHRRG RRRRTADLAA DASEGPQPYI SGPMPVKTED  240
SLPAFFPQVS MDGAEPVVAP VVNTESSVLT PLFKEMVRAM LGIGGCPSPL GLGAKVREQP  300
SAVLGIPMEG EKWRQQRILE LEVYLRRIDL LQDEVKSALE ELKSTPPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-44	GeBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG019550.1