PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG018280.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 516aa    MW: 56497.8 Da    PI: 6.5119
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG018280.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.61.4e-33296350155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       k+r+rWtpeLHe+Fv+ v++LGGsekAtPk +l+lmkv+gLt++hvkSHLQkYR+
  TRIDC4AG018280.3 296 KQRMRWTPELHECFVDSVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRT 350
                       79****************************************************8 PP
2Myb_DNA-binding50.54.9e-16298349148
                       TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r+rWT+e++e +vd v++lGg    t+k + + m   g+t +++ks++qky+
  TRIDC4AG018280.3 298 RMRWTPELHECFVDSVNKLGGSekaTPKGVLKLMKvDGLTIYHVKSHLQKYR 349
                       89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    
GNWWASSSSC AHQVPPPLSL PSQNSPLLSS PPPKAAPIQQ LPHNPTQEHI KINLWERHNA  60
CAQFLMRRCD LRQSHNSRVS GGMSSSLPIL PNSLKETFHG PYNPQLTPMQ RQLTSDLVPL  120
HQSALPSATL HPRAGAMRSS YAASLGYSPN PLDSAPNHER QSMVAPFAPQ PSDIEVFQTL  180
SNNIPGGHTG ATWFPGSADG LSDYRDNIPA SGSQIQNGGP AVTSDVVAKQ NEWWAEIMND  240
DWRDILDATA ADPQSKSMVQ PSNSAASQPA VNQPASSHGG EICNVASPPN SNSAAKQRMR  300
WTPELHECFV DSVNKLGGSE KATPKGVLKL MKVDGLTIYH VKSHLQKYRT ARYKPDLTEG  360
TAEKRTTTEE LTLDLKSSMD LTEALRLQME VQKRLHEQLE TQRKLQLRIE EQGKYLQMMF  420
EKQSKSNTEK VQDLSSGATT TLLSEPSHPA TRDRDNDAAD DLNRTGENPV SAEIGETSMH  480
AGGNQEMAES ESSDPLANTN DGSKAPQEKR QRVHDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.17e-71G2-like family protein