PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG016370.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 227aa MW: 26432.1 Da PI: 7.5

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG016370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.8	2e-09	11	52	49	90
FAR1 49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + er+++++ r +C a+l++++++dg w+v++ + HnHe+ TRIDC4AG016370.1 11 KPERENSSSMRSNCAAMLRLHRTDDGGWYVSENRASHNHEML 52 45788999*******************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MQEIVCGCAG KPERENSSSM RSNCAAMLRL HRTDDGGWYV SENRASHNHE MLRTCAEKLH 60 WPSHRHIDTY TRDLVKQLCQ NNVNLGKVYT IIGSLFGRME NVPFTKRCLR TFCGKLSKEQ 120 ADYDVRKTMD AFSKLGSNDP EFSYVVEVDK ESEIKTLLWT NGRSKMQYHN FEDVITFDTT 180 YKTNLYDMPF GLFVGVNNHF QSIIMGGVMM REETIESFKW VFTEFIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-29	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG016370.1