PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG015350.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 231aa    MW: 25495.1 Da    PI: 8.0017
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG015350.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.16.2e-10388286
          trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                      W+++e+ +L++a   +    +rg+l +  W++v +++      +   f+r+p  Ck +++ l+ ry ++++ e+      +s +++f +l+
  TRIDC4AG015350.1  3 WSDEETSVLVDAWGPLYLGRNRGSLSMEEWDSVCRAVdahhaaAGLDFSRNPAGCKRRISALKARYTEEAAKEQP-----TSAWRHFAHLR 88
                      *************************************99998777889********************9999997.....45799999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MHWSDEETSV LVDAWGPLYL GRNRGSLSME EWDSVCRAVD AHHAAAGLDF SRNPAGCKRR  60
ISALKARYTE EAAKEQPTSA WRHFAHLRAF LADPSGGPPG FGAKKPEASV KKEKKKVEGA  120
SGSVGTTKVP AKRQFSSLRD ILAKTPATVK EEEVVGCGCE LVGGSAAGVS VTKLVAEMTR  180
LAEVHERVEM ERLKFMKEML MMKMKEEEET EDVKLERKKV KAENEEQVHG N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104116KKPEASVKKEKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-10Trihelix family protein