PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG011220.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 77aa MW: 8435.01 Da PI: 4.539 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.1 | 5.5e-10 | 2 | 47 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 ++W+ E e++ +a + +G + W+++a+ +g g+t+ +++ ++ TRIDC4AG011220.2 2 MAWSDAENERFERALATYGRDtagLWERVAAAVGGGKTADDVRRHY 47 68*****************99************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 77 aa Download sequence |
EMAWSDAENE RFERALATYG RDTAGLWERV AAAVGGGKTA DDVRRHYDLL TQDIGDIESG 60 RYGYPNGGAN GNTNRNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 7e-20 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG011220.2 |