PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG010210.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 816aa    MW: 89916.5 Da    PI: 5.182
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG010210.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.56.4e-08105147347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT +E+e + +a +q G++ +++I  +++  +   q++++++ +
  TRIDC4AG010210.6 105 AWTRQEEESFFNALRQVGKN-FEKITLRVQ-SKNKDQVRHYYYRL 147
                       6*****************99.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 816 aa     Download sequence    
DPSFSDCSHL SFLNFPQFLQ IPNSPISKFP QTVENFVPNR NLLAALPDRH HEKSRDICAA  60
NVMEKEVCEE MSPLSQPVDL PDATAPSASD PSQKPAKKAT RQWAAWTRQE EESFFNALRQ  120
VGKNFEKITL RVQSKNKDQV RHYYYRLVRR MKKLLGPGFS LDARNSKDTI AAMLRWWSLL  180
EKFSCSASKL HLKPRRFKTF VDALGNQLLK DRKRTRRKCS LGDTRLSSSS PVLSKTPGNQ  240
SFAVGLLPMD AQNGSKGASS KGAFMKRVAE PNSNKSGVIR GDLSATRTVR QKRRAGGAGA  300
CAAYKKWERA AMAGVSLVAD AAEELERKMT TQNLSCNADA TVLASSPNNV STVDADVGTN  360
HMKEADPQAP SKLKLQLFPI NEATRKALEK DDHNPHLELT LSSKKKMSSV LEHLNRKWGN  420
SNIACGELVL FPYCAHQEDL ATYQRWTTQD TVAVADVFFS VNSPSIFRLR YGWFSLAELE  480
AGLSEISLTR FENCMIPEDI QVKSSSEACV QKDGTLPSDF TSEQSSNNSK DQSALLLGTP  540
SSTGKNAAEE PSINTFPSQS GDHNQEQVPA NQAFEVDPQM DCLAISEVDW ADTLTDISVG  600
YLLTEASKAA NLDCEVTSIA KNPLFDENPC SYDSFDAAVA LHASRYQAAE QPAQTSHSTI  660
WGAEETCDEF SFMLATARKQ QGLNTSASSP PDSDNEVHSS NSEGFQGFLQ DLAGGDTLGN  720
PCADDVKAME ELCARSPPQS DNDFGLKDQP LDDAFWPESL GPLDLDIPPI RSLADEFILG  780
DSQNSWSRMM ENSMDAFRNM SFFVSDNNDS VLPPIM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.21e-162MYB_related family protein