PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG010210.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 727aa MW: 80000.3 Da PI: 5.2912

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG010210.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.5e-08	17	59	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G++ +++I +++ + q++++++ + TRIDC4AG010210.12 17 AWTRQEEESFFNALRQVGKN-FEKITLRVQ-SKNKDQVRHYYYRL 59 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 727 aa Download sequence
APSASDPTKK ATRQWAAWTR QEEESFFNAL RQVGKNFEKI TLRVQSKNKD QVRHYYYRLV 60 RRMKKLLGPG FSLDARNSKD TIAAMLRWWS LLEKFSCSAS KLHLKPRRFK TFVDALGNQL 120 LKDRKRTRRK CSLGDTRLSS SSPVLSKTPG NQSFAVGLLP MDAQNGSKGA SSKGAFMKRV 180 AEPNSNKSGV IRGDLSATRT VRQKRRAGGA GACAAYKKWE RAAMAGVSLV ADAAEELERK 240 MTTQNLSCNA DATVLASSPN NVSTVDDVGT NHMKEADPQA PSKLKLQLFP INEATRKALE 300 KDDHNPHLEL TLSSKKKMSS VLEHLNRKWG NSNIACGELV LFPYCAHQED LATYQRWTTQ 360 DTVAVADVFF SVNSPSIFRL RYGWFSLAEL EAGLSEISLT RFENCMIPED IQVKSSSEAC 420 VQKDGTLPSD FTSEQSSNNS KDQSALLLGT PSSTGKNAAE EPSINTFPSQ SGDHNQEQVP 480 ANQAFEVDPQ MDCLAISEVD WADTLTDISV GYLLTEASKA ANLDCEVTSI AKNPLFDENP 540 CSYDSFDAAV ALHASRYQAA EQPAQTSHST IWGAEETCDE FSFMLATARK QQGLNTSASS 600 PPDSDNEVHS SNSEGFQGFL QDLAGGDTLG NPCADDVKAM EELCARSPPQ SDNDFGLKDQ 660 PLDDAFWPES LGPLDLDIPP IRSLADEFIL GDSQNSWSRM MENSMDAFRN MSFFVSDNND 720 SVLPPIM

Sequence ? help Back to Top

Protein Sequence Length: 727 aa Download sequence

APSASDPTKK ATRQWAAWTR QEEESFFNAL RQVGKNFEKI TLRVQSKNKD QVRHYYYRLV  60
RRMKKLLGPG FSLDARNSKD TIAAMLRWWS LLEKFSCSAS KLHLKPRRFK TFVDALGNQL  120
LKDRKRTRRK CSLGDTRLSS SSPVLSKTPG NQSFAVGLLP MDAQNGSKGA SSKGAFMKRV  180
AEPNSNKSGV IRGDLSATRT VRQKRRAGGA GACAAYKKWE RAAMAGVSLV ADAAEELERK  240
MTTQNLSCNA DATVLASSPN NVSTVDDVGT NHMKEADPQA PSKLKLQLFP INEATRKALE  300
KDDHNPHLEL TLSSKKKMSS VLEHLNRKWG NSNIACGELV LFPYCAHQED LATYQRWTTQ  360
DTVAVADVFF SVNSPSIFRL RYGWFSLAEL EAGLSEISLT RFENCMIPED IQVKSSSEAC  420
VQKDGTLPSD FTSEQSSNNS KDQSALLLGT PSSTGKNAAE EPSINTFPSQ SGDHNQEQVP  480
ANQAFEVDPQ MDCLAISEVD WADTLTDISV GYLLTEASKA ANLDCEVTSI AKNPLFDENP  540
CSYDSFDAAV ALHASRYQAA EQPAQTSHST IWGAEETCDE FSFMLATARK QQGLNTSASS  600
PPDSDNEVHS SNSEGFQGFL QDLAGGDTLG NPCADDVKAM EELCARSPPQ SDNDFGLKDQ  660
PLDDAFWPES LGPLDLDIPP IRSLADEFIL GDSQNSWSRM MENSMDAFRN MSFFVSDNND  720
SVLPPIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	1e-163	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG010210.12