PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG010210.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 706aa MW: 77633.7 Da PI: 5.485

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG010210.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.3e-08	43	85	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G++ +++I +++ + q++++++ + TRIDC4AG010210.10 43 AWTRQEEESFFNALRQVGKN-FEKITLRVQ-SKNKDQVRHYYYRL 85 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
MEKEVCEEMS PLSQPVDLPD ATAPSASDPS QKPAKKATRQ WAAWTRQEEE SFFNALRQVG 60 KNFEKITLRV QSKNKDQVRH YYYRLVRRMK KLLGPGFSLD ARNSKDTIAA MLRWWSLLEK 120 FSCSASKLHL KPRRFKTFVD ALGNQLLKDR KRTRRKCSLG DTRLSSSSPV LSKTPGNQSF 180 AVGLLPMDAQ NGSKGASSKG AFMKRVAEPN SNKSGVIRGD LSATRTVRQK RRAGGAGACA 240 AYKKWERAAM AGVSLVADAA EELERKMTTQ NLSCNADATV LASSPNNVST VDADVGTNHM 300 KEADPQAPSK LKLQLFPINE ATRKALEKDD HNPHLELTLS SKKKMSSVLE HLNRKWGNSN 360 IACGELVLFP YCAHQEDLAT YQRWTTQDTV AVADVFFSVN SPSIFRLRYG WFSLAELEAG 420 LSEISLTRFE NCMIPEDIQV KSSSEACVQK DGTLPSDFTS EQSSNNSKDQ SALLLGTPSS 480 TGKNAAEEPS INTFPSQSGD HNQEQVPANQ AFEVDPQMDC LAISEVDWAD TLTDISVGYL 540 LTEASKAANL DCEVTSIAKN PLFDENPCSY DSFDAAVALH ASRYQAAEQP AQTSHSTIWG 600 AEETCDEFSF MLATARKQQG LNTSASSPPD SDNEVHSSNS EGFQGFLQDL AGGDTLGNPC 660 ADDVKAMEEL CARSPPQSDN DFGLKDQPLD DAFWQTSYAE TYIFIF

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

MEKEVCEEMS PLSQPVDLPD ATAPSASDPS QKPAKKATRQ WAAWTRQEEE SFFNALRQVG  60
KNFEKITLRV QSKNKDQVRH YYYRLVRRMK KLLGPGFSLD ARNSKDTIAA MLRWWSLLEK  120
FSCSASKLHL KPRRFKTFVD ALGNQLLKDR KRTRRKCSLG DTRLSSSSPV LSKTPGNQSF  180
AVGLLPMDAQ NGSKGASSKG AFMKRVAEPN SNKSGVIRGD LSATRTVRQK RRAGGAGACA  240
AYKKWERAAM AGVSLVADAA EELERKMTTQ NLSCNADATV LASSPNNVST VDADVGTNHM  300
KEADPQAPSK LKLQLFPINE ATRKALEKDD HNPHLELTLS SKKKMSSVLE HLNRKWGNSN  360
IACGELVLFP YCAHQEDLAT YQRWTTQDTV AVADVFFSVN SPSIFRLRYG WFSLAELEAG  420
LSEISLTRFE NCMIPEDIQV KSSSEACVQK DGTLPSDFTS EQSSNNSKDQ SALLLGTPSS  480
TGKNAAEEPS INTFPSQSGD HNQEQVPANQ AFEVDPQMDC LAISEVDWAD TLTDISVGYL  540
LTEASKAANL DCEVTSIAKN PLFDENPCSY DSFDAAVALH ASRYQAAEQP AQTSHSTIWG  600
AEETCDEFSF MLATARKQQG LNTSASSPPD SDNEVHSSNS EGFQGFLQDL AGGDTLGNPC  660
ADDVKAMEEL CARSPPQSDN DFGLKDQPLD DAFWQTSYAE TYIFIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	1e-147	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG010210.10