PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG009990.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 154aa MW: 16936.8 Da PI: 10.7693 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 262.6 | 2.2e-80 | 38 | 154 | 185 | 301 |
GAGA_bind 185 erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGy 277 +rs+ + k +++v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yPLP++tkrrgaRiagrKmSqgafkk+LekLa+eGy TRIDC4AG009990.7 38 TRSRGPLKPVEMVINGIDFDISRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAGRKMSQGAFKKVLEKLAGEGY 130 68999**************************************************************************************** PP GAGA_bind 278 dlsnpvDLkdhWAkHGtnkfvtir 301 +l+np+DLk++WAkHGtnkfvtir TRIDC4AG009990.7 131 NLNNPIDLKTFWAKHGTNKFVTIR 154 ***********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MVTANPLVAC PPSRRLFTWI LCAMRPGCTP RSISISSTRS RGPLKPVEMV INGIDFDISR 60 IPTPVCSCTG APQQCYRWGA GGWQSACCTT SISTYPLPMN TKRRGARIAG RKMSQGAFKK 120 VLEKLAGEGY NLNNPIDLKT FWAKHGTNKF VTIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14685.1 | 4e-63 | BBR-BPC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG009990.7 |