PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG009990.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 328aa MW: 36161.3 Da PI: 10.2522 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 361.2 | 2.1e-110 | 2 | 328 | 1 | 301 |
GAGA_bind 1 mdddgsre.rnkgyyepaaslkenlglqlmssia..erdaki.......rernlalsekkaavaerd..................maflqrdk 65 mdddgs + rn+g+ye k nlglqlm s+a rd+k+ +++ a +++ +++++rd m+f+++++ TRIDC4AG009990.6 2 MDDDGSLSiRNWGFYETM---KGNLGLQLMPSVAggHRDTKPllpngtfLQHHNAPHHPPHSHHPRDygngepsggmpteppaihMDFVRNEA 91 9**************965...*************999*****999999955555699999********************************* PP GAGA_bind 66 alaernkalverdnkllalllvensla........salpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkk 150 ++++++++ + r++k+l+ ++ + +++p+g +++++++ +++lq+ ++++ +++eeek+ + +e+++++ k+ + TRIDC4AG009990.6 92 WMHHQHQHQHSREQKVLHAVPLGPAGHighpghavHHHPTGFGMMPDARGAHTLQM-----MQPQEPPVPEEEKIAPPL-VEEHSVVGSKPPV 178 *******************99988877788999999********************.....677777777888766555.5567777888888 PP GAGA_bind 151 kkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyP 243 kkrq++++pk +k kk+kk +++ ++ +++ +rs+ + k +++v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yP TRIDC4AG009990.6 179 KKRQQGRQPKLPKPKKPKK-VATPGEDGAPKARAPRSRGPLKPVEMVINGIDFDISRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYP 270 88*****************.556667777777779********************************************************** PP GAGA_bind 244 LPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 LP++tkrrgaRiagrKmSqgafkk+LekLa+eGy+l+np+DLk++WAkHGtnkfvtir TRIDC4AG009990.6 271 LPMNTKRRGARIAGRKMSQGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 328 *********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
EMDDDGSLSI RNWGFYETMK GNLGLQLMPS VAGGHRDTKP LLPNGTFLQH HNAPHHPPHS 60 HHPRDYGNGE PSGGMPTEPP AIHMDFVRNE AWMHHQHQHQ HSREQKVLHA VPLGPAGHIG 120 HPGHAVHHHP TGFGMMPDAR GAHTLQMMQP QEPPVPEEEK IAPPLVEEHS VVGSKPPVKK 180 RQQGRQPKLP KPKKPKKVAT PGEDGAPKAR APRSRGPLKP VEMVINGIDF DISRIPTPVC 240 SCTGAPQQCY RWGAGGWQSA CCTTSISTYP LPMNTKRRGA RIAGRKMSQG AFKKVLEKLA 300 GEGYNLNNPI DLKTFWAKHG TNKFVTIR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 192 | 198 | PKKPKKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68120.1 | 2e-63 | BBR-BPC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG009990.6 |