PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG009990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 348aa MW: 38699.9 Da PI: 10.3305 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 349.7 | 6.4e-107 | 1 | 348 | 1 | 301 |
GAGA_bind 1 mdddgsre.rnkgyyepaaslkenlglqlmssia..erdaki.......rernlalsekkaavaerd..................maflqrdk 65 mdddgs + rn+g+ye k nlglqlm s+a rd+k+ +++ a +++ +++++rd m+f+++++ TRIDC4AG009990.1 1 MDDDGSLSiRNWGFYETM---KGNLGLQLMPSVAggHRDTKPllpngtfLQHHNAPHHPPHSHHPRDygngepsggmpteppaihMDFVRNEA 90 9**************965...*************999*****999999955555699999********************************* PP GAGA_bind 66 alaernkalverdnkllalllvensla.............................salpvgvqvlsgtksidslqqlsepqledsavelree 129 +++ ++++ ++++ +++++++ + +++p+g +++++++ +++lq+ ++++ +++ee TRIDC4AG009990.1 91 WMHPSQHQHQQQHQHHHQNQHQQQHQHqhqhsreqkvlhavplgpaghighpghavHHHPTGFGMMPDARGAHTLQM-----MQPQEPPVPEE 178 **983333333333333232222222223455789999999999999999999999999999999999999999999.....66667777788 PP GAGA_bind 130 eklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqC 222 ek+ + +e+++++ k+ +kkrq++++pk +k kk+kk +++ ++ +++ +rs+ + k +++v+ng+++D+s++P+PvCsCtGa++qC TRIDC4AG009990.1 179 EKIAPPL-VEEHSVVGSKPPVKKRQQGRQPKLPKPKKPKK-VATPGEDGAPKARAPRSRGPLKPVEMVINGIDFDISRIPTPVCSCTGAPQQC 269 8766555.556777788888888*****************.556667777777779************************************* PP GAGA_bind 223 YkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 Y+WG+GGWqSaCCtt+iS+yPLP++tkrrgaRiagrKmSqgafkk+LekLa+eGy+l+np+DLk++WAkHGtnkfvtir TRIDC4AG009990.1 270 YRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAGRKMSQGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 348 ******************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MDDDGSLSIR NWGFYETMKG NLGLQLMPSV AGGHRDTKPL LPNGTFLQHH NAPHHPPHSH 60 HPRDYGNGEP SGGMPTEPPA IHMDFVRNEA WMHPSQHQHQ QQHQHHHQNQ HQQQHQHQHQ 120 HSREQKVLHA VPLGPAGHIG HPGHAVHHHP TGFGMMPDAR GAHTLQMMQP QEPPVPEEEK 180 IAPPLVEEHS VVGSKPPVKK RQQGRQPKLP KPKKPKKVAT PGEDGAPKAR APRSRGPLKP 240 VEMVINGIDF DISRIPTPVC SCTGAPQQCY RWGAGGWQSA CCTTSISTYP LPMNTKRRGA 300 RIAGRKMSQG AFKKVLEKLA GEGYNLNNPI DLKTFWAKHG TNKFVTIR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 212 | 218 | PKKPKKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68120.1 | 4e-63 | BBR-BPC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG009990.1 |