PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG009450.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 537aa MW: 62531.1 Da PI: 8.6909

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG009450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	46.5	1.2e-14	111	190	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn Y+ e+GF +r ks+++ +g ++++ Cs+ gk+++ +++ ++rt+C a++++ +++d+ w++ + + HnHe+ TRIDC4AG009450.1 111 DYYNLYSWECGFGIRYGKSRTN-VKGAKSMQELLCSCGGKPKKINSS---------SSRTECPAMIRLLRTEDDGWYICEYRVSHNHEML 190 59**************9998.7777999******9986555.........9****************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MAVKETRALS TVVEADEVDS SNASTEQHVS TVLDCESGQK SRTPSFIDVE RGNSGWVRRH 60 RHGAMPDERA ASADRISALE LAFRGFAERK GEAVVVPSMG LTFDSLGEAY DYYNLYSWEC 120 GFGIRYGKSR TNVKGAKSMQ ELLCSCGGKP KKINSSSSRT ECPAMIRLLR TEDDGWYICE 180 YRVSHNHEML HTYAQKLHFP SHRHIDKYTR ELVSRLRQNN VNLSKVYSII GTFFGRIENV 240 PFTKRCLRTL CAKLSRDQAD EDVKKTMDYF AELKQYDPEF TYTVRVDSES RVQTLIWTTG 300 KSKLQYHYFG DVITFDTTYR TNLYDMPFGL FVGVNNHFQS VIYAGVLMRD EKVETFNWVF 360 SEFVKLMGGK KTITILTDQA RAMEVAIEEV YPEATHRWCK WHVLKKAKES LGTLYNKRSE 420 FRDEFHKLIQ DMLTVEEFEK QWKELIDKHS LQKNTFLIQT YEKRQMWAKP YFAGKFCARM 480 TSTQHSESAN HMLKNYVPPG CPMNLFVKQY SKLQFDRDQE EGFQEKRTRL VKFCIYV

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MAVKETRALS TVVEADEVDS SNASTEQHVS TVLDCESGQK SRTPSFIDVE RGNSGWVRRH  60
RHGAMPDERA ASADRISALE LAFRGFAERK GEAVVVPSMG LTFDSLGEAY DYYNLYSWEC  120
GFGIRYGKSR TNVKGAKSMQ ELLCSCGGKP KKINSSSSRT ECPAMIRLLR TEDDGWYICE  180
YRVSHNHEML HTYAQKLHFP SHRHIDKYTR ELVSRLRQNN VNLSKVYSII GTFFGRIENV  240
PFTKRCLRTL CAKLSRDQAD EDVKKTMDYF AELKQYDPEF TYTVRVDSES RVQTLIWTTG  300
KSKLQYHYFG DVITFDTTYR TNLYDMPFGL FVGVNNHFQS VIYAGVLMRD EKVETFNWVF  360
SEFVKLMGGK KTITILTDQA RAMEVAIEEV YPEATHRWCK WHVLKKAKES LGTLYNKRSE  420
FRDEFHKLIQ DMLTVEEFEK QWKELIDKHS LQKNTFLIQT YEKRQMWAKP YFAGKFCARM  480
TSTQHSESAN HMLKNYVPPG CPMNLFVKQY SKLQFDRDQE EGFQEKRTRL VKFCIYV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-63	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG009450.1