PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG009310.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 221aa MW: 25442.3 Da PI: 9.1357

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG009310.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.9	7.5e-18	27	79	2	54
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 rk+ ++tkeq Le+ F+++++++ +++ LAk+l+L rqV vWFqNrRa+ TRIDC4AG009310.7 27 RKKLRLTKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRAR 79 788899**********************************************8 PP
2	HD-ZIP_I/II	85.4	7.6e-28	27	80	1	54
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARt 54 +kk+rl+keq++lLE+ F+e+++L+p++Kv+la++L+l+prqv+vWFqnrRAR TRIDC4AG009310.7 27 RKKLRLTKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARL 80 69***************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
RAEEAELGEM VSSTAVGAEE DDDGSTRKKL RLTKEQSALL EDRFKEHSTL NPKQKVALAK 60 QLNLRPRQVE VWFQNRRARL VTLYSTYYYT HISMHSRLYY GPLLELTCNN SCIIHLFIFS 120 KKKTGNHFVC CTPISIHFVL RPCMHEKSAE PLPKITGHFG PGGELSLISN VGSRVTRACR 180 TKLKQTEVDC EFLKRCCETL TEENRRLQRE LQELRAIKFA P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	26	32	TRKKLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	1e-31	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG009310.7