PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG009200.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 626aa MW: 67444.7 Da PI: 7.0941

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG009200.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.6	9.6e-16	283	342	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ +g ++ ++++lg ++ +++Aa+a++ a++k++g TRIDC4AG009200.4 283 SQYRGVTRHRWTGRYEAHLWDnSCKkDGqtRKgRQVYLGGYDNEDKAARAYDLAALKYWG 342 78*****************988898888446******99***********98 PP
2	AP2	46.9	7.1e-15	385	436	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TRIDC4AG009200.4 385 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFTTQEEAAEAYDVAAIKFRG 436 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MRTMASGGNW LGFSLSPHMA MEVPSSSEPD HAQPASASAM SASPTNAATC NLLFSQPAQM 60 AAPPPGYYYV GGAYGDGTST AGVYYSHHPV MPITSDGSLC IMEGMMPSSS PKLEDFLGGG 120 NGSGHDAVTY YSHQQQDQQD QEASRIYHHH QQQQQQLAPY NFQHLTEAEA IYQEATAPMD 180 EAMAAAKNQL VTSYGSCYSN AGMQPLSLSM SPRSQSSSCV SAAPQQHQMA AAAAAASLAA 240 SQGGSNGGGE QEQCVGKKRG TGKGGQKQPV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH 300 LWDNSCKKDG QTRKGRQVYL GGYDNEDKAA RAYDLAALKY WGPSTNTNFP LENYREEVEE 360 MKSMTRQEFV AHLRRRSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFTTQ 420 EEAAEAYDVA AIKFRGLNAV TNFDITRYDV DKIMESSSLL PGDEARKVKA VEAANHVPAM 480 HNGGGEISHA EEGSSGVWRM VLHGTPQQAA QCTPEVADLQ KGFMGGGDPR SSLHGIAGFD 540 VESAAHDIDV SGKINYSNPS SLVTSLSNSR EGSPERFSLP SLYAKHPNAV SVASMSPWMA 600 MPAPAAAHVL RGPNSSMPVF AAWTDA

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MRTMASGGNW LGFSLSPHMA MEVPSSSEPD HAQPASASAM SASPTNAATC NLLFSQPAQM  60
AAPPPGYYYV GGAYGDGTST AGVYYSHHPV MPITSDGSLC IMEGMMPSSS PKLEDFLGGG  120
NGSGHDAVTY YSHQQQDQQD QEASRIYHHH QQQQQQLAPY NFQHLTEAEA IYQEATAPMD  180
EAMAAAKNQL VTSYGSCYSN AGMQPLSLSM SPRSQSSSCV SAAPQQHQMA AAAAAASLAA  240
SQGGSNGGGE QEQCVGKKRG TGKGGQKQPV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH  300
LWDNSCKKDG QTRKGRQVYL GGYDNEDKAA RAYDLAALKY WGPSTNTNFP LENYREEVEE  360
MKSMTRQEFV AHLRRRSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFTTQ  420
EEAAEAYDVA AIKFRGLNAV TNFDITRYDV DKIMESSSLL PGDEARKVKA VEAANHVPAM  480
HNGGGEISHA EEGSSGVWRM VLHGTPQQAA QCTPEVADLQ KGFMGGGDPR SSLHGIAGFD  540
VESAAHDIDV SGKINYSNPS SLVTSLSNSR EGSPERFSLP SLYAKHPNAV SVASMSPWMA  600
MPAPAAAHVL RGPNSSMPVF AAWTDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-113	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG009200.4