PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG008870.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARR-B

Protein Properties

Length: 706aa MW: 76598.4 Da PI: 7.9938

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008870.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.9	2.3e-28	225	278	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl TRIDC4AG008870.4 225 KPRVVWSVELHQQFVNAVNHL-GIDKAVPKKILELMNVPGLTRENVASHLQKFRL 278 79*****************.******************************8 PP
2	Myb_DNA-binding	39.6	1.2e-12	227	277	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+ lG + +k+I + m+ g+t++++ s++qk++ TRIDC4AG008870.4 227 RVVWSVELHQQFVNAVNHLGIDkaVPKKILELMNvPGLTRENVASHLQKFR 277 678**********************************************97 PP
3	Response_reg	57	1.1e-19	65	149	26	109
EEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 26 vaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 ++++++++ al++l+e++ +D+i+ D+ mp+m+G++ll+ e++lp+i+++a + +++ + +k Ga d+l Kp+ +eel + TRIDC4AG008870.4 65 ATTCSQATRALAMLRENRgaFDVIISDVHMPDMNGFRLLELVGL-EMDLPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEELKN 149 5789999*****999999***************87754.558*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
KYRTGQLKTF CTPMNILKRS VWLYMTYTFG RHIILSLPTS EMLLYPIYVT VLFSAPSYNP 60 FFCAATTCSQ ATRALAMLRE NRGAFDVIIS DVHMPDMNGF RLLELVGLEM DLPVIMMSAD 120 SRTDLVMKGI KHGACDYLIK PVRMEELKNI WQHVVRKKFG GSKEHEHSGS LDDTDRNRLT 180 NNDNEYASSA NDGAEDSWKS QKKKRDKEED DSELESGDPS NNSKKPRVVW SVELHQQFVN 240 AVNHLGIDKA VPKKILELMN VPGLTRENVA SHLQKFRLYL KRIAQHHAGM ANPYSVPASS 300 AQVASLGGLD FQALAASGQI PPQALAALQD ELLGRPTNSL VLPGRDQSSL RLAAVKGNKP 360 HGEQIAFGQP IYKVQNNSYA ALPQNSSAVG RMPSFSAWPN NKLGMSDSMS ALGHVNNSQN 420 SNMVLHELQQ QPDTMLSGTL HTLDVKPSGI VMPSQSLNTF PASEGLSPNQ NSLIIPSQSS 480 GFLTGIPPSM KPELVLPTSQ SSNSLLGGID LINQASTSQP FISSHGGNLP GLMNRNSNVM 540 PSQGISSFQT GNTPYLVNQN SMGMGSKPPG VLKTESTDSL NQNYAYANHM DSGLLSSQSK 600 NAQFGFLQSP NDITGGWSSL QNMDGYRNTV GPSQPVSSSS SFQSSNAALG KLPDQGRGKN 660 LGFVGKGTCI PNRFAVDEIE SPTNSLSHSI GSSGDIPDMF GFSGQM

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

KYRTGQLKTF CTPMNILKRS VWLYMTYTFG RHIILSLPTS EMLLYPIYVT VLFSAPSYNP  60
FFCAATTCSQ ATRALAMLRE NRGAFDVIIS DVHMPDMNGF RLLELVGLEM DLPVIMMSAD  120
SRTDLVMKGI KHGACDYLIK PVRMEELKNI WQHVVRKKFG GSKEHEHSGS LDDTDRNRLT  180
NNDNEYASSA NDGAEDSWKS QKKKRDKEED DSELESGDPS NNSKKPRVVW SVELHQQFVN  240
AVNHLGIDKA VPKKILELMN VPGLTRENVA SHLQKFRLYL KRIAQHHAGM ANPYSVPASS  300
AQVASLGGLD FQALAASGQI PPQALAALQD ELLGRPTNSL VLPGRDQSSL RLAAVKGNKP  360
HGEQIAFGQP IYKVQNNSYA ALPQNSSAVG RMPSFSAWPN NKLGMSDSMS ALGHVNNSQN  420
SNMVLHELQQ QPDTMLSGTL HTLDVKPSGI VMPSQSLNTF PASEGLSPNQ NSLIIPSQSS  480
GFLTGIPPSM KPELVLPTSQ SSNSLLGGID LINQASTSQP FISSHGGNLP GLMNRNSNVM  540
PSQGISSFQT GNTPYLVNQN SMGMGSKPPG VLKTESTDSL NQNYAYANHM DSGLLSSQSK  600
NAQFGFLQSP NDITGGWSSL QNMDGYRNTV GPSQPVSSSS SFQSSNAALG KLPDQGRGKN  660
LGFVGKGTCI PNRFAVDEIE SPTNSLSHSI GSSGDIPDMF GFSGQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	5e-92	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008870.4