PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG008870.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 679aa MW: 73134.2 Da PI: 6.7626 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90 | 2.2e-28 | 198 | 251 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl TRIDC4AG008870.2 198 KPRVVWSVELHQQFVNAVNHL-GIDKAVPKKILELMNVPGLTRENVASHLQKFRL 251 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 39.6 | 1.2e-12 | 200 | 250 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+ lG + +k+I + m+ g+t++++ s++qk++ TRIDC4AG008870.2 200 RVVWSVELHQQFVNAVNHLGIDkaVPKKILELMNvPGLTRENVASHLQKFR 250 678**********************************************97 PP | |||||||
3 | Response_reg | 76.7 | 8.4e-26 | 14 | 122 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl+vdD+++ + +l+++l + +y +++++++++ al++l+e++ +D+i+ D+ mp+m+G++ll+ e++lp+i+++a + +++ + +k TRIDC4AG008870.2 14 VLVVDDDQTCLAVLKRMLVQCRY-DATTCSQATRALAMLRENRgaFDVIISDVHMPDMNGFRLLELVGL-EMDLPVIMMSADSRTDLVMKGIK 104 89*********************.*****************9999*******************87754.558******************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ +eel + TRIDC4AG008870.2 105 HGACDYLIKPVRMEELKN 122 ***************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 679 aa Download sequence |
EAGGGDQFPV GMKVLVVDDD QTCLAVLKRM LVQCRYDATT CSQATRALAM LRENRGAFDV 60 IISDVHMPDM NGFRLLELVG LEMDLPVIMM SADSRTDLVM KGIKHGACDY LIKPVRMEEL 120 KNIWQHVVRK KFGGSKEHEH SGSLDDTDRN RLTNNDNEYA SSANDGAEDS WKSQKKKRDK 180 EEDDSELESG DPSNNSKKPR VVWSVELHQQ FVNAVNHLGI DKAVPKKILE LMNVPGLTRE 240 NVASHLQKFR LYLKRIAQHH AGMANPYSVP ASSAQVASLG GLDFQALAAS GQIPPQALAA 300 LQDELLGRPT NSLVLPGRDQ SSLRLAAVKG NKPHGEQIAF GQPIYKVQNN SYAALPQNSS 360 AVGRMPSFSA WPNNKLGMSD SMSALGHVNN SQNSNMVLHE LQQQPDTMLS GTLHTLDVKP 420 SGIVMPSQSL NTFPASEGLS PNQNSLIIPS QSSGFLTGIP PSMKPELVLP TSQSSNSLLG 480 GIDLINQAST SQPFISSHGG NLPGLMNRNS NVMPSQGISS FQTGNTPYLV NQNSMGMGSK 540 PPGVLKTEST DSLNQNYAYA NHMDSGLLSS QSKNAQFGFL QSPNDITGGW SSLQNMDGYR 600 NTVGPSQPVS SSSSFQSSNA ALGKLPDQGR GKNLGFVGKG TCIPNRFAVD EIESPTNSLS 660 HSIGSSGDIP DMFGFSGQM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-107 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG008870.2 |