PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG008600.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 555aa MW: 62321.6 Da PI: 4.7001

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008600.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	30.8	8.4e-10	4	71	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +yfF+k+ + ++++ + + W++ g +++++ +g l g+k+t+++y+ ++++++tdW +h+y + TRIDC4AG008600.9 4 DGHALYFFHKKINLDNNEND--K---DISWQKNGPSRSIIL-DGGLRGCKETFALYT-FKNSPRRTDWELHQYYI 71 45678**99987655333..3...335********.999*******5.666778*******75 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MRQDGHALYF FHKKINLDNN ENDKDISWQK NGPSRSIILD GGLRGCKETF ALYTFKNSPR 60 RTDWELHQYY IKNTMENEGE LVLSKVFYKS QKSHCECAAK ASVQSAQDNS VTDDDSREEK 120 EDAQLEKLSV NMATESNGNN QEQMLVEMYP DQDKPCSLKH VLDTADVNHE NQINDQAETE 180 LDHMSLQDRY RILLADMRSC SARVSAEKCA LNDMGNSSMQ MDAETSGPVP KSESEEINHE 240 GTAYRECSVN GKEIPVEDTE GPVNDKAFNS SAELLLSQTP ACGDENVQLA PRNSGTYLVD 300 VKTEPALDGY AIYPSESPVK FQHSNNDGLK VSGSILECVP KDAEDSLPSL GVKSELSGYE 360 LPGLCENSFI SSMEPIVKKP HTRTLNCNGG LAPCSRQRKK RDSSEKVLEE DGYKNDEGIP 420 YPSRQKRKKK TATDSIETAL EEDAPGLLQI LLDKGIVVKE IKLYDVVEDD EMLPDCTESD 480 FQDLENVITK LFPQRTSLLK SVAKHGKGGK AIYCLACLIS LIEQSRYLQF RDCPVEWGWC 540 RDLQSFIFVF KSHNR

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MRQDGHALYF FHKKINLDNN ENDKDISWQK NGPSRSIILD GGLRGCKETF ALYTFKNSPR  60
RTDWELHQYY IKNTMENEGE LVLSKVFYKS QKSHCECAAK ASVQSAQDNS VTDDDSREEK  120
EDAQLEKLSV NMATESNGNN QEQMLVEMYP DQDKPCSLKH VLDTADVNHE NQINDQAETE  180
LDHMSLQDRY RILLADMRSC SARVSAEKCA LNDMGNSSMQ MDAETSGPVP KSESEEINHE  240
GTAYRECSVN GKEIPVEDTE GPVNDKAFNS SAELLLSQTP ACGDENVQLA PRNSGTYLVD  300
VKTEPALDGY AIYPSESPVK FQHSNNDGLK VSGSILECVP KDAEDSLPSL GVKSELSGYE  360
LPGLCENSFI SSMEPIVKKP HTRTLNCNGG LAPCSRQRKK RDSSEKVLEE DGYKNDEGIP  420
YPSRQKRKKK TATDSIETAL EEDAPGLLQI LLDKGIVVKE IKLYDVVEDD EMLPDCTESD  480
FQDLENVITK LFPQRTSLLK SVAKHGKGGK AIYCLACLIS LIEQSRYLQF RDCPVEWGWC  540
RDLQSFIFVF KSHNR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	398	428	RKKRDSSEKVLEEDGYKNDEGIPYPSRQKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	7e-15	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008600.9