PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG008140.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 165aa MW: 19268.2 Da PI: 10.2831 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.5 | 3.5e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+ rqvtf+kRrng+lKKA+ELS LCdaeva+iifs +g+l+e+ss TRIDC4AG008140.3 10 RIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 69.3 | 1.3e-23 | 85 | 143 | 13 | 71 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKne 71 ++e +qe+ kLk ++e Lq++qR++lGedL++Ls+keL q+e+q++ slk+iRskK + TRIDC4AG008140.3 85 ENEINYQEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDASLKHIRSKKFK 143 567789***************************************************75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MGRGKVEMRR IENKISRQVT FAKRRNGLLK KAYELSLLCD AEVALIIFSG RGRLFEFSSS 60 SCMYKTLERY RTCNSNSQEA APPLENEINY QEYLKLKTRV EFLQSSQRNI LGEDLGPLSM 120 KELDQIENQI DASLKHIRSK KFKQNIKRKW KETLPPLDLN SINKH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 3e-63 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG008140.3 |