PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG008110.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 177aa MW: 19580.6 Da PI: 9.0637

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008110.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	56.2	1.5e-17	1	46	1	46
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsll 46 +d++s se++Cyv+C++Cnt+l v vP + l+ +vtv+CGhC +l TRIDC4AG008110.4 1 MDLVSPSEHLCYVRCTYCNTVLQVGVPCKRLMDTVTVKCGHCNNLS 46 578999*************************************984 PP
2	YABBY	91.8	1.7e-28	88	148	102	162
YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162 s +++ +pr+p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa TRIDC4AG008110.4 88 SPTSSDASPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 148 5556778899***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MDLVSPSEHL CYVRCTYCNT VLQVGVPCKR LMDTVTVKCG HCNNLSFLSP RPPPMVQPLS 60 PNDHHHPMGP FQGCTDCRRN QPLPPLASPT SSDASPRAPF VVKPPEKKHR LPSAYNRFMR 120 EEIQRIKAAK PDIPHREAFS MAAKNWAKCD PRCSSTVSAS NSAPEPRIVV PGPQMGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	1e-51	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008110.4