PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG008110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 200aa MW: 22304.7 Da PI: 8.7243 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 57.6 | 5.6e-18 | 4 | 49 | 1 | 46 |
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsll 46 +d++s se++Cyv+C++Cnt+lav vP + l+ +vtv+CGhC +l TRIDC4AG008110.1 4 MDLVSPSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLS 49 578999*************************************984 PP | |||||||
2 | YABBY | 91.5 | 2.1e-28 | 91 | 151 | 102 | 162 |
YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162 s +++ +pr+p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa TRIDC4AG008110.1 91 SPTSSDASPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 151 555677889*9************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MQSMDLVSPS EHLCYVRCTY CNTVLAVGVP CKRLMDTVTV KCGHCNNLSF LSPRPPPMVQ 60 PLSPNDHHHP MGPFQGCTDC RRNQPLPPLA SPTSSDASPR APFVVKPPEK KHRLPSAYNR 120 FMREEIQRIK AAKPDIPHRE AFSMAAKNWA KCDPRCSSTV SASNSAPEPR IVVPGPQLQE 180 RATEQVVESF DIFKQMERSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 3e-52 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG008110.1 |