PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG004960.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 213aa MW: 23994.1 Da PI: 5.9498 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 51.4 | 1.8e-16 | 6 | 38 | 38 | 71 |
E2F_TDP 38 dvknkrRRiYDilNVLealnliekkekneirwkg 71 d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg TRIDC4AG004960.7 6 DEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 38 789*********************.*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MQQQYDEKNI RRRVYDALNV LMAMDIISKD KKEIQWKGLP RTSINDIEEL QADLAGVKAR 60 IEKKSAYLQE LQDQYLGMQN LINRNEQLYG SGNIPSGGVA LPFILIQTRP HATVEVEISE 120 DMQLVHFDFN TTPFELHDDS YVLKALNSYG KEENAGTSEP ISNGCEGSST PNIYRHQIQQ 180 SAMASNGTNR LPSSPPPPVP GILKGRVKHE HLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.1 | 1e-86 | E2F/DP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG004960.7 |