PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG004960.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 294aa    MW: 33071.2 Da    PI: 8.6052
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG004960.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.22.4e-2733119371
           E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       +++Lr++++k   ++ek+e+ g++t+neva+eLv+e                     d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC4AG004960.6  33 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpnnnieppdpdnpnaqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 119
                       689*******...*****999************************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
RHQRRRRAFL AGPHQSIKKK KRRAAAVGPD KGGRGLRQFS MKVCEKVESK GRTTYNEVAD  60
ELVAEFTDPN NNIEPPDPDN PNAQQYDEKN IRRRVYDALN VLMAMDIISK DKKEIQWKGL  120
PRTSINDIEE LQADLAGVKA RIEKKSAYLQ ELQDQYLGMQ NLINRNEQLY GSGNIPSGGV  180
ALPFILIQTR PHATVEVEIS EDMQLVHFDF NTTPFELHDD SYVLKALNSY GKEENAGTSE  240
PISNGCEGSS TPNIYRHQIQ QSAMASNGTN RLPSSPPPPV PGILKGRVKH EHLY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1423RRRRAFLAGPHQSIKKKKRR
2524RRRRAFLAGPHQSIKKKKRR
31823KKKKRR
41924KKKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-115E2F/DP family protein