PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG004960.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 166aa    MW: 18715.2 Da    PI: 8.1755
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG004960.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP886.5e-2840126371
           E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       +++Lr++++k   ++ek+e+ g++t+neva+eLv+e                     d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC4AG004960.4  40 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpnnnieppdpdnpnaqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 126
                       689*******...*****999************************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
AFLRLNNLDI NGDDAPSSQA PISIKKKKRR AAAVGPDKGG RGLRQFSMKV CEKVESKGRT  60
TYNEVADELV AEFTDPNNNI EPPDPDNPNA QQYDEKNIRR RVYDALNVLM AMDIISKDKK  120
EIQWKGLPRT SINDIEELQA DLAGVKARIE KKSAYLQELQ DQVCRT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12530KKKKRR
22631KKKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.13e-68E2F/DP family protein