PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG004960.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 316aa    MW: 33768.6 Da    PI: 6.1592
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG004960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP862.7e-27134220371
           E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       +++Lr++++k   ++ek+e+ g++t+neva+eLv+e                     d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC4AG004960.1 134 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpnnnieppdpdnpnaqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 220
                       689*******...*****999************************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
LLPNSARSRL IPASMVSGVP HRPDENGGGG GPSFPQQPAP VGTPPPSSGP AHSASTSGGS  60
AGGSPSSRSE QQGPAAANGA GPGPAASTPA SDGTAFLRLN NLDINGDDAP SSQAPISIKK  120
KKRRAAAVGP DKGGRGLRQF SMKVCEKVES KGRTTYNEVA DELVAEFTDP NNNIEPPDPD  180
NPNAQQYDEK NIRRRVYDAL NVLMAMDIIS KDKKEIQWKG LPRTSINDIE ELQADLAGVK  240
ARIEKKSAYL QELQDQYLGM QNLINRNEQL YGSGNIPSGG VALPFILIQT RPHATVEVEI  300
SEDMQLVHFD FNTRVW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119124KKKKRR
2120125KKKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-108E2F/DP family protein