PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG004850.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 281aa    MW: 30502.4 Da    PI: 6.6002
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG004850.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51.1e-20112162256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+ta+eAa a++aa+ +l+ge
  TRIDC4AG004850.2 112 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTADEAALAYDAAAFRLRGE 162
                       59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MATTVDWRSY RPDLPAAMYH MVDGRDQVMH AFAPPTAQGA APTISFSFPC PGAEQSAGLL  60
RGASYLTPAQ ILQLQSQLHH VRRAPGAAMA VAGQPMKRHG VAALPAQPAA KLYRGVRQRH  120
WGKWVAEIRL PRNRTRLWLG TFDTADEAAL AYDAAAFRLR GESARLNFPE LRRGGEHHGP  180
PLDAAIDAKL RSICHGEDLP QSQSNATPAP TPTLTPSSFP DVKSEPGCSV SESSSSADGE  240
VSSCSDVVPE MQLLDFSEAP WDESLLRKYP SLEIDWDAIL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.11e-45ERF family protein