PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG003950.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 598aa MW: 65620.1 Da PI: 7.0342

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG003950.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.7e-12	444	490	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ +I +Lq TRIDC4AG003950.3 444 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITHITDLQ 490 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence
MKTEIEEEGT RGSWTEEDKS LCASVLGLDA FTYLTKGGGA ISENLVAASA LVGLQNKLQD 60 LVEADGKSLR WNYAIFWQLS HTKSGELVLG WGDGSCREPH DNEMNSTTRG DIHDASSLSQ 120 QRMRKRVLER LHTAFAGADE EDDALRIDQV TDTELFFLAS MYFAFPCHVG GPGQVFATGA 180 PLWIPNNPHK VSPSNYCYRG FLASAAGFRT IVLLPFEAGV LELGSMQNVL ESAEALETIR 240 SVFLGASSKK AASEKHDENS SAQISPGLAK IFGKDLNLSR PLVNTGAVPL KMNERSWDMQ 300 KNCGGESLLL PNVRKGLQNF TWSQARGLNS HHQKFGNGIL VVKSETSQRS NGAAHSPGLS 360 PFQLQNSQQI LTQPPPQSQT PRHIDFSVGS SSKSGVLTSQ AALLGGENGS VDGLCKEQVA 420 PAMEGQPPRK RGRKPANGRV EALNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG 480 DAITHITDLQ KKLKEMESER DMFLESGMVD RRVQTPRPEV DIQVVQDEVL VRVMSPMDNY 540 PINNVFQAFE EAEVKVGESK ITSNNGKVMH SFVIKSPGSE QQTREKLIAA MSRAMNSM

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence

MKTEIEEEGT RGSWTEEDKS LCASVLGLDA FTYLTKGGGA ISENLVAASA LVGLQNKLQD  60
LVEADGKSLR WNYAIFWQLS HTKSGELVLG WGDGSCREPH DNEMNSTTRG DIHDASSLSQ  120
QRMRKRVLER LHTAFAGADE EDDALRIDQV TDTELFFLAS MYFAFPCHVG GPGQVFATGA  180
PLWIPNNPHK VSPSNYCYRG FLASAAGFRT IVLLPFEAGV LELGSMQNVL ESAEALETIR  240
SVFLGASSKK AASEKHDENS SAQISPGLAK IFGKDLNLSR PLVNTGAVPL KMNERSWDMQ  300
KNCGGESLLL PNVRKGLQNF TWSQARGLNS HHQKFGNGIL VVKSETSQRS NGAAHSPGLS  360
PFQLQNSQQI LTQPPPQSQT PRHIDFSVGS SSKSGVLTSQ AALLGGENGS VDGLCKEQVA  420
PAMEGQPPRK RGRKPANGRV EALNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG  480
DAITHITDLQ KKLKEMESER DMFLESGMVD RRVQTPRPEV DIQVVQDEVL VRVMSPMDNY  540
PINNVFQAFE EAEVKVGESK ITSNNGKVMH SFVIKSPGSE QQTREKLIAA MSRAMNSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-130	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG003950.3