PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG003830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 250aa MW: 28883.8 Da PI: 8.314 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.8 | 1.2e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+ rqvtf+kRrng+lKKA+ELS LCdaeva+iifs g+l+e+ss TRIDC4AG003830.1 10 RIENKTTRQVTFTKRRNGLLKKAYELSLLCDAEVALIIFSGGGRLFEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 92.1 | 9.8e-31 | 84 | 171 | 12 | 99 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 a++e +qe+ kLk ++e Lq++qR++lGedL++L+++eL+q+e+q++ slk+iR++Kn++ll+++ +l+ ke+el ++nk+Lrkkl TRIDC4AG003830.1 84 AENEINYQEYLKLKTRLEYLQSSQRNILGEDLGPLTMRELEQIENQIDISLKHIRTRKNKVLLDELYDLKSKEQELLDQNKDLRKKLH 171 5667789******************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MGRGKVEIRR IENKTTRQVT FTKRRNGLLK KAYELSLLCD AEVALIIFSG GGRLFEFSSS 60 SCMYKILERY RTCNYNSPEA TPPAENEINY QEYLKLKTRL EYLQSSQRNI LGEDLGPLTM 120 RELEQIENQI DISLKHIRTR KNKVLLDELY DLKSKEQELL DQNKDLRKKL HDISCAENAL 180 HMSWQDGGHG SSSGHAIKTT YPGLLQRPEH DSSMQIGYIF LHGHRYHQLN NEDMAPQRLD 240 GHLGSFAGWI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 4e-73 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG003830.1 |