PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG002260.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 344aa MW: 37696.9 Da PI: 6.7321 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.6 | 4.4e-18 | 129 | 182 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rqV +WFqNrRa++k TRIDC4AG002260.2 129 KKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 182 4568999**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130.5 | 6.7e-42 | 128 | 218 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqv++LE++Fe +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr++da+k+en++L +++++L++e+ TRIDC4AG002260.2 128 EKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEI 218 69**************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
KKPMASNGMA SSPSAFFPPN FLLHMQQAPP QHDPSQEHHQ QHHHHHHHEX XXXXXXXXXX 60 XNPFLPSPQC PSLQDFRGGL SPMLGKRPAM YGGGGDGGCG GDEVTGGGGG GGANEEETSD 120 DGSQLGGEKK RRLNVEQVRT LEKNFEVANK LEPERKMQLA RALGLQPRQV AIWFQNRRAR 180 WKTKQLEKDY DVLKRQFDAV KAENDALLSH NKKLQSEILG LKGCREAASE LINLNKETEA 240 SCSNRSENSS EINLDISRTP PSDGPMDAPP SHQQGGGSGG GMIPFYPSVA RPSAGVDIDH 300 LLHASVPKME HHHGGPDTAS FGNLLCGVDE PPPFWPWADH QQFN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 177 | 185 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 7e-80 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG002260.2 |