PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG001730.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 781aa MW: 89463.1 Da PI: 7.8635

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG001730.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.6	4.1e-18	131	216	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ l+HnH+++p TRIDC4AG001730.5 131 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQYSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLDHNHPISP 216 5************9998887.7888************9999...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 781 aa Download sequence
SSRSRPGSHR RRRQAGTEFQ QFLTDCPAPS QPLSHRHATA SSSPFPGGSS PAELVTSQAV 60 AAAAAPRYLM EPDLTLDEVA EQNRSAPDEE DEDAFVVEEI GDSSDDRQAE PTVALEPKKG 120 MMFSSEDDAV RFYKAYARKK GFGVIRRTTR HGEDKMLTYF TLACNRQGKA QYSAKNSFKP 180 NPSTRMQCPA KSNFSRRGEN FCITTVTLDH NHPISPSKAR FLRCHKKVDL HSKRRLELND 240 QAGARMNKNF GSPVMEAGWY GNLEFGEKEC TNYLQEKRSL KLGAGDAHAL YQYFLHMQSK 300 DPAFFHVMDV AEDGRLRNVF WADARSRAAY ESYWDVITFD TTYLTNKYTI PLATFVGINH 360 HGESVLLGCG LLSNEDTETF VWLFKSWLCC MSCKPPNAII TDQCKPMQNA IEEVFPQARH 420 RWCACHIMKK IPENLNGYEN IKSTLSNVVY DSLTKHGFDK AWAEMINKYD LQENEWLAGL 480 YDNKNRWVPA YVKDTFWAGM SSTKRSESVN AFFDGYVNAR TTLKQFVEQY ENLLRDKVEK 540 ENKADSKSFQ QQIPCITHYD FERQFQAAYT TAKFKEFQDQ LRGKIYCYPT QLNKEGSIFT 600 FGVREDSKIF CEGEDGKGKE KRVILEFIVL FNQGECDVQC MCRLFEFRGI LCSHIISVLA 660 LMEITDVPSR YILQRWRKDI KRKHTFIRCS YDDMIDTQVV QRYDNLCKRS HELAENGAES 720 DALHDLVMDG LNELQSKIDA YCASVGCPPS KRKESKVDQV VKKLRAKKQQ VPTNTNEMPS 780 Q

Sequence ? help Back to Top

Protein Sequence Length: 781 aa Download sequence

SSRSRPGSHR RRRQAGTEFQ QFLTDCPAPS QPLSHRHATA SSSPFPGGSS PAELVTSQAV  60
AAAAAPRYLM EPDLTLDEVA EQNRSAPDEE DEDAFVVEEI GDSSDDRQAE PTVALEPKKG  120
MMFSSEDDAV RFYKAYARKK GFGVIRRTTR HGEDKMLTYF TLACNRQGKA QYSAKNSFKP  180
NPSTRMQCPA KSNFSRRGEN FCITTVTLDH NHPISPSKAR FLRCHKKVDL HSKRRLELND  240
QAGARMNKNF GSPVMEAGWY GNLEFGEKEC TNYLQEKRSL KLGAGDAHAL YQYFLHMQSK  300
DPAFFHVMDV AEDGRLRNVF WADARSRAAY ESYWDVITFD TTYLTNKYTI PLATFVGINH  360
HGESVLLGCG LLSNEDTETF VWLFKSWLCC MSCKPPNAII TDQCKPMQNA IEEVFPQARH  420
RWCACHIMKK IPENLNGYEN IKSTLSNVVY DSLTKHGFDK AWAEMINKYD LQENEWLAGL  480
YDNKNRWVPA YVKDTFWAGM SSTKRSESVN AFFDGYVNAR TTLKQFVEQY ENLLRDKVEK  540
ENKADSKSFQ QQIPCITHYD FERQFQAAYT TAKFKEFQDQ LRGKIYCYPT QLNKEGSIFT  600
FGVREDSKIF CEGEDGKGKE KRVILEFIVL FNQGECDVQC MCRLFEFRGI LCSHIISVLA  660
LMEITDVPSR YILQRWRKDI KRKHTFIRCS YDDMIDTQVV QRYDNLCKRS HELAENGAES  720
DALHDLVMDG LNELQSKIDA YCASVGCPPS KRKESKVDQV VKKLRAKKQQ VPTNTNEMPS  780
Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-129	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG001730.5